RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 CREB3L3Q68CJ9 461 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
MCM3-205ENST00000596288 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
MCM3-205ENST00000596288 TPCN1Q9ULQ1 816 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 RBM8AQ9Y5S9 174 aaKnown RBP10.64□□□□□ -0.71
MCM3-205ENST00000596288 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 CHGBP05060 677 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
MCM3-205ENST00000596288 GJB2P29033 226 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 TERF1P54274 439 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 UBE2HP62256 183 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 ZNF790Q6PG37 636 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 PDRG1Q9NUG6 133 aa10.64□□□□□ -0.71
MCM3-205ENST00000596288 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
MCM3-205ENST00000596288 MCM5P33992 734 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 CCDC183Q5T5S1 534 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 DRC7Q8IY82 874 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
MCM3-205ENST00000596288 NPHP3Q7Z494 1330 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 SLC27A2O14975 620 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 RFX5P48382 616 aaPredicted RBP10.63□□□□□ -0.71
MCM3-205ENST00000596288 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 CCDC8Q9H0W5 538 aaPredicted RBP10.63□□□□□ -0.71
MCM3-205ENST00000596288 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 SASS6Q6UVJ0 657 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
MCM3-205ENST00000596288 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
MCM3-205ENST00000596288 AFDNP55196 1824 aaKnown RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 DNM1Q05193 864 aaKnown RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 GCKRQ14397 625 aa10.62□□□□□ -0.71
MCM3-205ENST00000596288 ZNF589Q86UQ0 364 aaPredicted RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 EDC3Q96F86 508 aaKnown RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 CCDC39Q9UFE4 941 aa10.62□□□□□ -0.71
MCM3-205ENST00000596288 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
MCM3-205ENST00000596288 ZSCAN31Q96LW9 406 aaPredicted RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 ALDH8A1Q9H2A2 487 aaPredicted RBP10.62□□□□□ -0.71
MCM3-205ENST00000596288 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
MCM3-205ENST00000596288 PHF14O94880 888 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 PHKG2P15735 406 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 TOB2Q14106 344 aaPredicted RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 TSGA10IPQ3SY00 556 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 CCDC94Q9BW85 323 aaPredicted RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 USPL1Q5W0Q7 1092 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 AP5Z1O43299 807 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 KRT28Q7Z3Y7 464 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 PDCL2Q8N4E4 241 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 METTL22Q9BUU2 404 aaPredicted RBP10.61□□□□□ -0.71
MCM3-205ENST00000596288 BOLA2Q9H3K6 86 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
MCM3-205ENST00000596288 TJP1Q07157 1748 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 ADCY5O95622 1261 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 DDX58O95786 925 aaKnown RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 RABL6Q3YEC7 729 aaPredicted RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 COPRSQ9NQ92 184 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 DBNLQ9UJU6 430 aaKnown RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 HIP1O00291 1037 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 DYNC1I1O14576 645 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 CASP7P55210 303 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 G3BP1Q13283 466 aaKnown RBP eCLIP10.6□□□□□ -0.713e-7■■□□□ 11.7
MCM3-205ENST00000596288 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 CDC37L1Q7L3B6 337 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 COPS6Q7L5N1 327 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 ZNF330Q9Y3S2 320 aaPredicted RBP10.6□□□□□ -0.71
MCM3-205ENST00000596288 NUP188Q5SRE5 1749 aa10.6□□□□□ -0.71
MCM3-205ENST00000596288 TAF5LO75529 589 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■□□□ 13.7
MCM3-205ENST00000596288 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
MCM3-205ENST00000596288 RAB11FIP4Q86YS3 637 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 SMAP1Q8IYB5 467 aaPredicted RBP10.59□□□□□ -0.71
MCM3-205ENST00000596288 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
MCM3-205ENST00000596288 ZNF609O15014 1411 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 PLEKHG2Q9H7P9 1386 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 MYL6BP14649 208 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 TTC6Q86TZ1 520 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 BCL2L12Q9HB09 334 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 USP16Q9Y5T5 823 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 ZKSCAN1P17029 563 aaPredicted RBP10.59□□□□□ -0.71
MCM3-205ENST00000596288 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
MCM3-205ENST00000596288 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms