RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 TTLL11Q8NHH1 800 aa28.35■■■□□ 2.13
SNRNP70-204ENST00000595231 H0YIN7 160 aa28.34■■■□□ 2.13
SNRNP70-204ENST00000595231 PDZRN3Q9UPQ7 1066 aa28.34■■■□□ 2.13
SNRNP70-204ENST00000595231 CSF1RP07333 972 aa28.33■■■□□ 2.13
SNRNP70-204ENST00000595231 BICC1Q9H694 974 aaKnown RBP28.32■■■□□ 2.12
SNRNP70-204ENST00000595231 HOXA10P31260 410 aaPredicted RBP28.32■■■□□ 2.12
SNRNP70-204ENST00000595231 LRRFIP2Q9Y608 721 aaKnown RBP28.32■■■□□ 2.12
SNRNP70-204ENST00000595231 RABL6Q3YEC7 729 aaPredicted RBP28.31■■■□□ 2.12
SNRNP70-204ENST00000595231 ANKRD44Q8N8A2 993 aa28.31■■■□□ 2.12
SNRNP70-204ENST00000595231 MASTLQ96GX5 879 aa28.31■■■□□ 2.12
SNRNP70-204ENST00000595231 DLEC1Q9Y238 1755 aa28.31■■■□□ 2.12
SNRNP70-204ENST00000595231 NPR1P16066 1061 aa28.3■■■□□ 2.12
SNRNP70-204ENST00000595231 LMBR1LQ6UX01 489 aa28.3■■■□□ 2.12
SNRNP70-204ENST00000595231 CCDC85AQ96PX6 553 aaPredicted RBP28.3■■■□□ 2.12
SNRNP70-204ENST00000595231 ZBTB40Q9NUA8 1239 aa28.3■■■□□ 2.12
SNRNP70-204ENST00000595231 CRBNQ96SW2 442 aa28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 HDAC5Q9UQL6 1122 aa28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 GNAI2P04899 355 aa28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 CCDC152Q4G0S7 254 aa28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 STYK1Q6J9G0 422 aa28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 RPGRQ92834 1020 aaKnown RBP28.29■■■□□ 2.12
SNRNP70-204ENST00000595231 GREM2Q9H772 168 aa28.28■■■□□ 2.12
SNRNP70-204ENST00000595231 BRCA1P38398 1863 aaKnown RBP28.28■■■□□ 2.12
SNRNP70-204ENST00000595231 TAF1P21675 1872 aa28.27■■■□□ 2.12
SNRNP70-204ENST00000595231 ZNF622Q969S3 477 aaKnown RBP eCLIP28.27■■■□□ 2.122e-14■□□□□ 8.1
SNRNP70-204ENST00000595231 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.12
SNRNP70-204ENST00000595231 SEC31BQ9NQW1 1179 aa28.26■■■□□ 2.12
SNRNP70-204ENST00000595231 RTL9Q8NET4 1388 aa28.26■■■□□ 2.11
SNRNP70-204ENST00000595231 FAM161AQ3B820 660 aa28.26■■■□□ 2.11
SNRNP70-204ENST00000595231 RBM17Q96I25 401 aaKnown RBP28.26■■■□□ 2.11
SNRNP70-204ENST00000595231 C1orf115Q9H7X2 142 aa28.26■■■□□ 2.11
SNRNP70-204ENST00000595231 COL4A1P02462 1669 aa28.25■■■□□ 2.11
SNRNP70-204ENST00000595231 DDX46Q7L014 1031 aaKnown RBP28.25■■■□□ 2.11
SNRNP70-204ENST00000595231 CHMP4BQ9H444 224 aaKnown RBP28.25■■■□□ 2.11
SNRNP70-204ENST00000595231 PIM2Q9P1W9 311 aa28.25■■■□□ 2.11
SNRNP70-204ENST00000595231 ALDH1B1P30837 517 aa28.24■■■□□ 2.11
SNRNP70-204ENST00000595231 ITGA6P23229 1130 aa28.23■■■□□ 2.11
SNRNP70-204ENST00000595231 IRX6P78412 446 aaPredicted RBP28.23■■■□□ 2.11
SNRNP70-204ENST00000595231 CELF1Q92879 486 aaKnown RBP28.23■■■□□ 2.11
SNRNP70-204ENST00000595231 CNKSR1Q969H4 720 aa28.23■■■□□ 2.11
SNRNP70-204ENST00000595231 CHMP3Q9Y3E7 222 aa28.23■■■□□ 2.11
SNRNP70-204ENST00000595231 MTX1Q13505 466 aa28.22■■■□□ 2.11
SNRNP70-204ENST00000595231 TTLL6Q8N841 843 aa28.22■■■□□ 2.11
SNRNP70-204ENST00000595231 WWC3Q9ULE0 1092 aa28.22■■■□□ 2.11
SNRNP70-204ENST00000595231 SLX4Q8IY92 1834 aa28.22■■■□□ 2.11
SNRNP70-204ENST00000595231 GRAPQ13588 217 aa28.21■■■□□ 2.11
SNRNP70-204ENST00000595231 GRAPLQ8TC17 118 aaPredicted RBP28.21■■■□□ 2.11
SNRNP70-204ENST00000595231 IFIT5Q13325 482 aaKnown RBP28.2■■■□□ 2.11
SNRNP70-204ENST00000595231 CACNA1SQ13698 1873 aa28.2■■■□□ 2.1
SNRNP70-204ENST00000595231 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
SNRNP70-204ENST00000595231 EXOC6Q8TAG9 804 aa28.19■■■□□ 2.1
SNRNP70-204ENST00000595231 RPS8P62241 208 aaKnown RBP28.19■■■□□ 2.1
SNRNP70-204ENST00000595231 CCDC57Q2TAC2 916 aa28.19■■■□□ 2.1
SNRNP70-204ENST00000595231 DALRD3Q5D0E6 543 aaKnown RBP28.19■■■□□ 2.1
SNRNP70-204ENST00000595231 ANKRD18BA2A2Z9 1011 aa28.18■■■□□ 2.1
SNRNP70-204ENST00000595231 BBOX1O75936 387 aa28.18■■■□□ 2.1
SNRNP70-204ENST00000595231 RFX5P48382 616 aaPredicted RBP28.18■■■□□ 2.1
SNRNP70-204ENST00000595231 UTRNP46939 3433 aa28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 PNMA6EA0A0J9YXQ4 647 aa28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 ATP8B2P98198 1209 aa28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 CEP85Q6P2H3 762 aa28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 C7orf43Q8WVR3 580 aa28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 CDC5LQ99459 802 aaKnown RBP28.17■■■□□ 2.1
SNRNP70-204ENST00000595231 SRGAP3O43295 1099 aa28.16■■■□□ 2.1
SNRNP70-204ENST00000595231 SLC51AQ86UW1 340 aa28.16■■■□□ 2.1
SNRNP70-204ENST00000595231 ZNF594Q96JF6 807 aaPredicted RBP28.16■■■□□ 2.1
SNRNP70-204ENST00000595231 BCS1LQ9Y276 419 aa28.16■■■□□ 2.1
SNRNP70-204ENST00000595231 ANKRD18AQ8IVF6 992 aa28.15■■■□□ 2.1
SNRNP70-204ENST00000595231 PPEF1O14829 653 aaPredicted RBP28.14■■■□□ 2.1
SNRNP70-204ENST00000595231 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
SNRNP70-204ENST00000595231 PTPN12Q05209 780 aaKnown RBP28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 SIRT2Q8IXJ6 389 aa28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 RPAP2Q8IXW5 612 aaPredicted RBP28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 POLA2Q14181 598 aa28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 OLFM4Q6UX06 510 aa28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 SSH3Q8TE77 659 aa28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 BSDC1Q9NW68 430 aaPredicted RBP28.13■■■□□ 2.09
SNRNP70-204ENST00000595231 C21orf2O43822 256 aa28.12■■■□□ 2.09
SNRNP70-204ENST00000595231 ATP6V0A2Q9Y487 856 aa28.12■■■□□ 2.09
SNRNP70-204ENST00000595231 PCDHB15Q9Y5E8 787 aa28.12■■■□□ 2.09
SNRNP70-204ENST00000595231 SPEF2Q9C093 1822 aa28.12■■■□□ 2.09
SNRNP70-204ENST00000595231 ARFGEF1Q9Y6D6 1849 aa28.12■■■□□ 2.09
SNRNP70-204ENST00000595231 YBX3P16989 372 aaKnown RBP eCLIP28.11■■■□□ 2.09
SNRNP70-204ENST00000595231 IGHMBP2P38935 993 aaKnown RBP28.11■■■□□ 2.09
SNRNP70-204ENST00000595231 AAMPQ13685 434 aa28.11■■■□□ 2.09
SNRNP70-204ENST00000595231 SP8Q8IXZ3 490 aa28.11■■■□□ 2.09
SNRNP70-204ENST00000595231 ZNF219Q9P2Y4 722 aaPredicted RBP28.11■■■□□ 2.09
SNRNP70-204ENST00000595231 TMC4Q7Z404 712 aa28.1■■■□□ 2.09
SNRNP70-204ENST00000595231 TAF7LQ5H9L4 462 aa28.1■■■□□ 2.09
SNRNP70-204ENST00000595231 MPHOSPH8Q99549 860 aa28.1■■■□□ 2.09
SNRNP70-204ENST00000595231 COPRSQ9NQ92 184 aa28.1■■■□□ 2.09
SNRNP70-204ENST00000595231 PA2G4Q9UQ80 394 aaKnown RBP28.1■■■□□ 2.09
SNRNP70-204ENST00000595231 LDHAL6AQ6ZMR3 332 aa28.09■■■□□ 2.09
SNRNP70-204ENST00000595231 PUS3Q9BZE2 481 aaKnown RBP28.09■■■□□ 2.09
SNRNP70-204ENST00000595231 LRRC37AA6NMS7 1700 aa28.08■■■□□ 2.09
SNRNP70-204ENST00000595231 MINPP1Q9UNW1 487 aa28.08■■■□□ 2.09
SNRNP70-204ENST00000595231 SNED1Q8TER0 1413 aa28.07■■■□□ 2.08
SNRNP70-204ENST00000595231 LRRC24Q50LG9 513 aa28.07■■■□□ 2.08
SNRNP70-204ENST00000595231 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
SNRNP70-204ENST00000595231 RIPOR2Q9Y4F9 1068 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms