RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	EXOC6	Q8TAG9	804 aa		14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	NLRP3	Q96P20	1036 aa		14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	CCDC85A	Q96PX6	553 aa	Predicted RBP	14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	SYT17	Q9BSW7	474 aa		14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	PPP1R1B	Q9UD71	204 aa	Predicted RBP	14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	COL4A1	P02462	1669 aa		14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	SRCAP	Q6ZRS2	3230 aa		14.25	□□□□□ -0.13
CIRBP-236	ENST00000592051	DDX60	Q8IY21	1712 aa	Known RBP	14.24	□□□□□ -0.13
CIRBP-236	ENST00000592051	TGFB2	P61812	414 aa		14.24	□□□□□ -0.13
CIRBP-236	ENST00000592051	GREM2	Q9H772	168 aa		14.24	□□□□□ -0.13
CIRBP-236	ENST00000592051	SEC31B	Q9NQW1	1179 aa		14.24	□□□□□ -0.13
CIRBP-236	ENST00000592051	KIAA1551	Q9HCM1	1747 aa		14.24	□□□□□ -0.13
CIRBP-236	ENST00000592051	GNAI2	P04899	355 aa		14.23	□□□□□ -0.13
CIRBP-236	ENST00000592051	FAM161A	Q3B820	660 aa		14.23	□□□□□ -0.13
CIRBP-236	ENST00000592051	RTL9	Q8NET4	1388 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	KIF13B	Q9NQT8	1826 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051		H0YIN7	160 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	NPR1	P16066	1061 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	RFX5	P48382	616 aa	Predicted RBP	14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	MTX1	Q13505	466 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	STYK1	Q6J9G0	422 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	SIRT2	Q8IXJ6	389 aa		14.22	□□□□□ -0.13
CIRBP-236	ENST00000592051	COL11A2	P13942	1736 aa	Predicted RBP	14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	HSP90B1	P14625	803 aa	Known RBP	14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	CCDC152	Q4G0S7	254 aa		14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	CEP85	Q6P2H3	762 aa		14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	CELF1	Q92879	486 aa	Known RBP	14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	MASTL	Q96GX5	879 aa		14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	CRAMP1	Q96RY5	1269 aa		14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	PCDHB15	Q9Y5E8	787 aa		14.21	□□□□□ -0.13
CIRBP-236	ENST00000592051	LAMB2	P55268	1798 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	PNMA6E	A0A0J9YXQ4	647 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	ITGA6	P23229	1130 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	ATP8B2	P98198	1209 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	C7orf43	Q8WVR3	580 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	RPGR	Q92834	1020 aa	Known RBP	14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	ZNF622	Q969S3	477 aa	Known RBP eCLIP	14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	WWC3	Q9ULE0	1092 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	PDZRN3	Q9UPQ7	1066 aa		14.2	□□□□□ -0.14
CIRBP-236	ENST00000592051	POLA2	Q14181	598 aa		14.19	□□□□□ -0.14
CIRBP-236	ENST00000592051	KLHDC4	Q8TBB5	520 aa		14.19	□□□□□ -0.14
CIRBP-236	ENST00000592051	RBM17	Q96I25	401 aa	Known RBP	14.19	□□□□□ -0.14
CIRBP-236	ENST00000592051	ZNF594	Q96JF6	807 aa	Predicted RBP	14.19	□□□□□ -0.14
CIRBP-236	ENST00000592051	GRAP	Q13588	217 aa		14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	PRPF40B	Q6NWY9	871 aa	Known RBP	14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	OLFM4	Q6UX06	510 aa		14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	DDX46	Q7L014	1031 aa	Known RBP	14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	GRAPL	Q8TC17	118 aa	Predicted RBP	14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	HDAC5	Q9UQL6	1122 aa		14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	CHMP3	Q9Y3E7	222 aa		14.18	□□□□□ -0.14
CIRBP-236	ENST00000592051	RPS8	P62241	208 aa	Known RBP	14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	PTPN12	Q05209	780 aa	Known RBP	14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	IFIT5	Q13325	482 aa	Known RBP	14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	TTLL6	Q8N841	843 aa		14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	SSH3	Q8TE77	659 aa		14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	CNKSR1	Q969H4	720 aa		14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	PUS3	Q9BZE2	481 aa	Known RBP	14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	PIM2	Q9P1W9	311 aa		14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	PA2G4	Q9UQ80	394 aa	Known RBP	14.17	□□□□□ -0.14
CIRBP-236	ENST00000592051	ANKRD18B	A2A2Z9	1011 aa		14.16	□□□□□ -0.14
CIRBP-236	ENST00000592051	SRGAP3	O43295	1099 aa		14.16	□□□□□ -0.14
CIRBP-236	ENST00000592051	CHMP4B	Q9H444	224 aa	Known RBP	14.16	□□□□□ -0.14
CIRBP-236	ENST00000592051	PPEF1	O14829	653 aa	Predicted RBP	14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	BBOX1	O75936	387 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	ALDH1B1	P30837	517 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	CCDC57	Q2TAC2	916 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	LRRC24	Q50LG9	513 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	DALRD3	Q5D0E6	543 aa	Known RBP	14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	RPAP2	Q8IXW5	612 aa	Predicted RBP	14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	COPRS	Q9NQ92	184 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	SNED1	Q8TER0	1413 aa		14.15	□□□□□ -0.14
CIRBP-236	ENST00000592051	YBX3	P16989	372 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	ATG9A	Q7Z3C6	839 aa		14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	ANKRD18A	Q8IVF6	992 aa		14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	CDC5L	Q99459	802 aa	Known RBP	14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	BSDC1	Q9NW68	430 aa	Predicted RBP	14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	ATP6V0A2	Q9Y487	856 aa		14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	RIPOR2	Q9Y4F9	1068 aa		14.14	□□□□□ -0.15
CIRBP-236	ENST00000592051	WTIP	A6NIX2	430 aa	Predicted RBP	14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	C21orf2	O43822	256 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	AAMP	Q13685	434 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	SP8	Q8IXZ3	490 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	MINPP1	Q9UNW1	487 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	BCS1L	Q9Y276	419 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	DLEC1	Q9Y238	1755 aa		14.13	□□□□□ -0.15
CIRBP-236	ENST00000592051	EYA2	O00167	538 aa		14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	LDHAL6A	Q6ZMR3	332 aa		14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	SIL1	Q9H173	461 aa		14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	NOP58	Q9Y2X3	529 aa	Known RBP	14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	SLX4	Q8IY92	1834 aa		14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	TAF1	P21675	1872 aa		14.12	□□□□□ -0.15
CIRBP-236	ENST00000592051	IGHD	P01880	384 aa		14.11	□□□□□ -0.15
CIRBP-236	ENST00000592051	IGHMBP2	P38935	993 aa	Known RBP	14.11	□□□□□ -0.15
CIRBP-236	ENST00000592051	GPSM2	P81274	684 aa		14.11	□□□□□ -0.15
CIRBP-236	ENST00000592051	TAF7L	Q5H9L4	462 aa		14.11	□□□□□ -0.15
CIRBP-236	ENST00000592051	SNAP23	O00161	211 aa		14.1	□□□□□ -0.15
CIRBP-236	ENST00000592051	CIAO1	O76071	339 aa		14.1	□□□□□ -0.15
CIRBP-236	ENST00000592051	TMC4	Q7Z404	712 aa		14.1	□□□□□ -0.15

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