RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 RFX1P22670 979 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 NR1H3Q13133 447 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
VMP1-213ENST00000591877 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
VMP1-213ENST00000591877 CBLBQ13191 982 aa10.86□□□□□ -0.67
VMP1-213ENST00000591877 TMCO4Q5TGY1 634 aa10.86□□□□□ -0.67
VMP1-213ENST00000591877 CCDC116Q8IYX3 515 aa10.86□□□□□ -0.67
VMP1-213ENST00000591877 C1QTNF2Q9BXJ5 285 aa10.86□□□□□ -0.67
VMP1-213ENST00000591877 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
VMP1-213ENST00000591877 TRAK1Q9UPV9 953 aa10.86□□□□□ -0.67
VMP1-213ENST00000591877 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
VMP1-213ENST00000591877 KIAA1210Q9ULL0 1709 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 SLC35F4A4IF30 521 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 XP32Q5T750 250 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 KANK3Q6NY19 840 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
VMP1-213ENST00000591877 ATP9BO43861 1147 aa10.84□□□□□ -0.67
VMP1-213ENST00000591877 FOXK2Q01167 660 aa10.84□□□□□ -0.67
VMP1-213ENST00000591877 POGKQ9P215 609 aa10.84□□□□□ -0.67
VMP1-213ENST00000591877 MAP4K5Q9Y4K4 846 aa10.84□□□□□ -0.67
VMP1-213ENST00000591877 MAGEB6P1A0A0J9YX57 407 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 ITGA6P23229 1130 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 RXRBP28702 533 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 SV2AQ7L0J3 742 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 KRT28Q7Z3Y7 464 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 SH3RF1Q7Z6J0 888 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
VMP1-213ENST00000591877 GZF1Q9H116 711 aaPredicted RBP10.83□□□□□ -0.68
VMP1-213ENST00000591877 ANKARQ7Z5J8 1434 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
VMP1-213ENST00000591877 CDK12Q9NYV4 1490 aaPredicted RBP10.82□□□□□ -0.68
VMP1-213ENST00000591877 ABCA3Q99758 1704 aa10.82□□□□□ -0.68
VMP1-213ENST00000591877 TRPM3Q9HCF6 1732 aaPredicted RBP10.82□□□□□ -0.68
VMP1-213ENST00000591877 ZBBXA8MT70 800 aa10.82□□□□□ -0.68
VMP1-213ENST00000591877 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
VMP1-213ENST00000591877 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
VMP1-213ENST00000591877 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
VMP1-213ENST00000591877 FKBPLQ9UIM3 349 aa10.82□□□□□ -0.68
VMP1-213ENST00000591877 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
VMP1-213ENST00000591877 SPINT1O43278 529 aa10.81□□□□□ -0.68
VMP1-213ENST00000591877 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
VMP1-213ENST00000591877 ELOAQ14241 798 aaKnown RBP10.8□□□□□ -0.68
VMP1-213ENST00000591877 NBPF1Q3BBV0 1214 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
VMP1-213ENST00000591877 LYPD4Q6UWN0 246 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 TBC1D9Q6ZT07 1266 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 CARD14Q9BXL6 1004 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 RGS12O14924 1447 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 TNS3Q68CZ2 1445 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 BCL9LQ86UU0 1499 aa10.8□□□□□ -0.68
VMP1-213ENST00000591877 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.79□□□□□ -0.68
VMP1-213ENST00000591877 FBXO45P0C2W1 286 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 RBM6P78332 1123 aaKnown RBP10.79□□□□□ -0.68
VMP1-213ENST00000591877 Q6ZVU0 165 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
VMP1-213ENST00000591877 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 USP21Q9UK80 565 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
VMP1-213ENST00000591877 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 ATRNO75882 1429 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
VMP1-213ENST00000591877 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 SH3BP5LQ7L8J4 393 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.687e-23■■□□□ 12.4
VMP1-213ENST00000591877 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 ATP7BP35670 1465 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 TOPAZ1Q8N9V7 1692 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 CRYBG1Q9Y4K1 1723 aa10.78□□□□□ -0.68
VMP1-213ENST00000591877 TRPM1Q7Z4N2 1603 aa10.77□□□□□ -0.68
VMP1-213ENST00000591877 TMEM88BA6NKF7 163 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 MFAP1P55081 439 aaKnown RBP10.77□□□□□ -0.69
VMP1-213ENST00000591877 PSME1Q06323 249 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 AGBL1Q96MI9 1066 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 SLIT2O94813 1529 aa10.77□□□□□ -0.69
VMP1-213ENST00000591877 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
VMP1-213ENST00000591877 MCCD1P59942 119 aaPredicted RBP10.76□□□□□ -0.69
VMP1-213ENST00000591877 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
VMP1-213ENST00000591877 VRTNQ9H8Y1 702 aa10.76□□□□□ -0.69
VMP1-213ENST00000591877 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
VMP1-213ENST00000591877 EIF3AQ14152 1382 aaKnown RBP10.76□□□□□ -0.69
VMP1-213ENST00000591877 GLI3P10071 1580 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 ADAM23O75077 832 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 MAP3K10Q02779 954 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 NUDT16Q96DE0 195 aaKnown RBP10.75□□□□□ -0.69
VMP1-213ENST00000591877 CDK19Q9BWU1 502 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 QRICH2Q9H0J4 1663 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
VMP1-213ENST00000591877 RELBQ01201 579 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms