RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CAVIN2O95810 425 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 KIF5CO60282 957 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 GRM1Q13255 1194 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 LINS1Q8NG48 757 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 EIF2AK4Q9P2K8 1649 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 GSDMDP57764 484 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 MPNDQ8N594 471 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-216ENST00000591545 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 CYP7A1P22680 504 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 SPA17Q15506 151 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 SHTN1A0MZ66 631 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 NLRP5P59047 1200 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 LIMCH1Q9UPQ0 1083 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 UVSSAQ2YD98 709 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 TESK2Q96S53 571 aa15.37■□□□□ 0.05
SMARCA4-216ENST00000591545 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 C8orf76Q96K31 380 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 CETN2P41208 172 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 PLCG2P16885 1265 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 GBP2P32456 591 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 PARP10Q53GL7 1025 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 FAM107BQ9H098 131 aa15.36■□□□□ 0.05
SMARCA4-216ENST00000591545 FGFR1OPO95684 399 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 GOLGA6L9A6NEM1 432 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 VEZTQ9HBM0 779 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 TAX1BP1Q86VP1 789 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 TBC1D2Q9BYX2 928 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 CASQ1P31415 396 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 FAM193AP78312 1265 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 BMP2KLQ5H9B9 411 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
SMARCA4-216ENST00000591545 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 IQSEC3Q9UPP2 1182 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 APBA3O96018 575 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 NCOA7Q8NI08 942 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 POTEJP0CG39 1038 aa15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-216ENST00000591545 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.05
SMARCA4-216ENST00000591545 VPS36Q86VN1 386 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 TSG101Q99816 390 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 VAT1LQ9HCJ6 419 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 SBNO1A3KN83 1393 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 TNNI2P48788 182 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 FERMT3Q86UX7 667 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 ANKRD62A6NC57 917 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 KIF20AO95235 890 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 CAMK4Q16566 473 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 POLR3AO14802 1390 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-216ENST00000591545 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 PLCD4Q9BRC7 762 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 B4DLN1 442 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 SSFA2P28290 1259 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
SMARCA4-216ENST00000591545 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 PICALMQ13492 652 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 KRT23Q9C075 422 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 URI1O94763 535 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 STX1AQ16623 288 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 TNNT1P13805 278 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 ESR2Q92731 530 aa15.31■□□□□ 0.04
SMARCA4-216ENST00000591545 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms