RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 CCDC146Q8IYE0 955 aa29.43■■■□□ 2.3
CXXC1-216ENST00000591474 NEUROD2Q15784 382 aa29.42■■■□□ 2.3
CXXC1-216ENST00000591474 TRIM35Q9UPQ4 493 aa29.42■■■□□ 2.3
CXXC1-216ENST00000591474 LRRC37AA6NMS7 1700 aa29.42■■■□□ 2.3
CXXC1-216ENST00000591474 CDHR2Q9BYE9 1310 aa29.42■■■□□ 2.3
CXXC1-216ENST00000591474 HOXB7P09629 217 aa29.41■■■□□ 2.3
CXXC1-216ENST00000591474 LBX1P52954 281 aa29.41■■■□□ 2.3
CXXC1-216ENST00000591474 DDX60Q8IY21 1712 aaKnown RBP29.41■■■□□ 2.3
CXXC1-216ENST00000591474 RUNDC1Q96C34 613 aa29.41■■■□□ 2.3
CXXC1-216ENST00000591474 CHPF2Q9P2E5 772 aa29.41■■■□□ 2.3
CXXC1-216ENST00000591474 TAF1P21675 1872 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 DUOX1Q9NRD9 1551 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 TRAF5O00463 557 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 CST9Q5W186 159 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 CIAPIN1Q6FI81 312 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 TMC4Q7Z404 712 aa29.4■■■□□ 2.3
CXXC1-216ENST00000591474 HSPA8P11142 646 aaKnown RBP29.39■■■□□ 2.3
CXXC1-216ENST00000591474 ECE1P42892 770 aa29.39■■■□□ 2.3
CXXC1-216ENST00000591474 GMPSP49915 693 aaPredicted RBP29.39■■■□□ 2.3
CXXC1-216ENST00000591474 PLBD2Q8NHP8 589 aa29.39■■■□□ 2.3
CXXC1-216ENST00000591474 HDGFL1Q5TGJ6 251 aa29.38■■■□□ 2.29
CXXC1-216ENST00000591474 CAPNS2Q96L46 248 aa29.38■■■□□ 2.29
CXXC1-216ENST00000591474 LAS1LQ9Y4W2 734 aaKnown RBP29.38■■■□□ 2.29
CXXC1-216ENST00000591474 TLL2Q9Y6L7 1015 aa29.38■■■□□ 2.29
CXXC1-216ENST00000591474 TNIP1Q15025 636 aa29.37■■■□□ 2.29
CXXC1-216ENST00000591474 ISCA1Q9BUE6 129 aa29.36■■■□□ 2.29
CXXC1-216ENST00000591474 PGAP2Q9UHJ9 254 aa29.36■■■□□ 2.29
CXXC1-216ENST00000591474 RAD17O75943 681 aa29.35■■■□□ 2.29
CXXC1-216ENST00000591474 WDR43Q15061 677 aaKnown RBP eCLIP29.35■■■□□ 2.292e-7■■■■□ 19.5
CXXC1-216ENST00000591474 ANKRD13DQ6ZTN6 518 aa29.35■■■□□ 2.29
CXXC1-216ENST00000591474 DBF4Q9UBU7 674 aaPredicted RBP29.35■■■□□ 2.29
CXXC1-216ENST00000591474 DDX10Q13206 875 aaKnown RBP29.34■■■□□ 2.29
CXXC1-216ENST00000591474 CYP4F22Q6NT55 531 aa29.34■■■□□ 2.29
CXXC1-216ENST00000591474 PAXIP1Q6ZW49 1069 aaPredicted RBP29.34■■■□□ 2.29
CXXC1-216ENST00000591474 BCL2L13Q9BXK5 485 aa29.34■■■□□ 2.29
CXXC1-216ENST00000591474 YDJCA8MPS7 323 aa29.33■■■□□ 2.29
CXXC1-216ENST00000591474 SF3B3Q15393 1217 aaKnown RBP29.33■■■□□ 2.29
CXXC1-216ENST00000591474 ZC3H15Q8WU90 426 aaKnown RBP29.33■■■□□ 2.29
CXXC1-216ENST00000591474 GPR101Q96P66 508 aaPredicted RBP29.33■■■□□ 2.29
CXXC1-216ENST00000591474 CFAP44Q96MT7 982 aa29.32■■■□□ 2.28
CXXC1-216ENST00000591474 SAPCD2Q86UD0 394 aa29.31■■■□□ 2.28
CXXC1-216ENST00000591474 ZNF428Q96B54 188 aa29.31■■■□□ 2.28
CXXC1-216ENST00000591474 FAM89AQ96GI7 184 aa29.31■■■□□ 2.28
CXXC1-216ENST00000591474 GLIS2Q9BZE0 524 aaPredicted RBP29.31■■■□□ 2.28
CXXC1-216ENST00000591474 HYPKQ9NX55 129 aa29.31■■■□□ 2.28
CXXC1-216ENST00000591474 CELF2O95319 508 aaKnown RBP29.3■■■□□ 2.28
CXXC1-216ENST00000591474 HIRAP54198 1017 aaPredicted RBP29.3■■■□□ 2.28
CXXC1-216ENST00000591474 TRPM4Q8TD43 1214 aa29.3■■■□□ 2.28
CXXC1-216ENST00000591474 CELF1Q92879 486 aaKnown RBP29.3■■■□□ 2.28
CXXC1-216ENST00000591474 ADAMTS8Q9UP79 889 aa29.3■■■□□ 2.28
CXXC1-216ENST00000591474 ATP5J2-PTCD1G3V325 749 aa29.29■■■□□ 2.28
CXXC1-216ENST00000591474 GRM1Q13255 1194 aa29.29■■■□□ 2.28
CXXC1-216ENST00000591474 TRIM28Q13263 835 aaKnown RBP29.29■■■□□ 2.28
CXXC1-216ENST00000591474 DUSP27Q5VZP5 1158 aa29.29■■■□□ 2.28
CXXC1-216ENST00000591474 HHIPL1Q96JK4 782 aa29.29■■■□□ 2.28
CXXC1-216ENST00000591474 BEGAINQ9BUH8 593 aa29.29■■■□□ 2.28
CXXC1-216ENST00000591474 CNOT7Q9UIV1 285 aaKnown RBP29.29■■■□□ 2.28
CXXC1-216ENST00000591474 MAP2K2P36507 400 aa29.28■■■□□ 2.28
CXXC1-216ENST00000591474 COL4A1P02462 1669 aa29.28■■■□□ 2.28
CXXC1-216ENST00000591474 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
CXXC1-216ENST00000591474 H7C1D1 291 aa29.26■■■□□ 2.27
CXXC1-216ENST00000591474 CDC37L1Q7L3B6 337 aa29.26■■■□□ 2.27
CXXC1-216ENST00000591474 MICALL2Q8IY33 904 aa29.26■■■□□ 2.27
CXXC1-216ENST00000591474 DPF2Q92785 391 aa29.26■■■□□ 2.27
CXXC1-216ENST00000591474 MBIPQ9NS73 344 aa29.26■■■□□ 2.27
CXXC1-216ENST00000591474 NSFL1CQ9UNZ2 370 aaKnown RBP29.26■■■□□ 2.27
CXXC1-216ENST00000591474 SHTN1A0MZ66 631 aa29.25■■■□□ 2.27
CXXC1-216ENST00000591474 PSMD14O00487 310 aa29.24■■■□□ 2.27
CXXC1-216ENST00000591474 IRS4O14654 1257 aaPredicted RBP29.24■■■□□ 2.27
CXXC1-216ENST00000591474 AOC2O75106 756 aa29.24■■■□□ 2.27
CXXC1-216ENST00000591474 ZNF853P0CG23 659 aa29.24■■■□□ 2.27
CXXC1-216ENST00000591474 POLLQ9UGP5 575 aa29.24■■■□□ 2.27
CXXC1-216ENST00000591474 GPSM2P81274 684 aa29.23■■■□□ 2.27
CXXC1-216ENST00000591474 ABHD8Q96I13 439 aa29.23■■■□□ 2.27
CXXC1-216ENST00000591474 DBNDD1Q9H9R9 158 aa29.23■■■□□ 2.27
CXXC1-216ENST00000591474 ZBTB12Q9Y330 459 aaPredicted RBP29.23■■■□□ 2.27
CXXC1-216ENST00000591474 RTL5Q5HYW3 569 aaPredicted RBP29.22■■■□□ 2.27
CXXC1-216ENST00000591474 EYA3Q99504 573 aa29.22■■■□□ 2.27
CXXC1-216ENST00000591474 C6orf229H3BNL8 230 aa29.21■■■□□ 2.27
CXXC1-216ENST00000591474 ZBTB38Q8NAP3 1195 aaPredicted RBP29.21■■■□□ 2.27
CXXC1-216ENST00000591474 ZNF408Q9H9D4 720 aa29.21■■■□□ 2.27
CXXC1-216ENST00000591474 RPS12P25398 132 aaKnown RBP29.2■■■□□ 2.26
CXXC1-216ENST00000591474 RPS8P62241 208 aaKnown RBP29.2■■■□□ 2.26
CXXC1-216ENST00000591474 GOLGA2Q08379 1002 aa29.2■■■□□ 2.26
CXXC1-216ENST00000591474 RIC3Q7Z5B4 369 aa29.2■■■□□ 2.26
CXXC1-216ENST00000591474 IFT57Q9NWB7 429 aa29.2■■■□□ 2.26
CXXC1-216ENST00000591474 RIMBP2O15034 1052 aa29.19■■■□□ 2.26
CXXC1-216ENST00000591474 CA12O43570 354 aa29.19■■■□□ 2.26
CXXC1-216ENST00000591474 ECE2O60344 883 aa29.19■■■□□ 2.26
CXXC1-216ENST00000591474 RTL9Q8NET4 1388 aa29.18■■■□□ 2.26
CXXC1-216ENST00000591474 HSP90B1P14625 803 aaKnown RBP29.18■■■□□ 2.26
CXXC1-216ENST00000591474 BRPF1P55201 1214 aaPredicted RBP29.18■■■□□ 2.26
CXXC1-216ENST00000591474 SAMD7Q7Z3H4 446 aa29.18■■■□□ 2.26
CXXC1-216ENST00000591474 TBC1D16Q8TBP0 767 aa29.18■■■□□ 2.26
CXXC1-216ENST00000591474 USP48Q86UV5 1035 aa29.17■■■□□ 2.26
CXXC1-216ENST00000591474 PHAXQ9H814 394 aaKnown RBP29.17■■■□□ 2.26
CXXC1-216ENST00000591474 PRKRIP1Q9H875 184 aaPredicted RBP29.17■■■□□ 2.26
CXXC1-216ENST00000591474 PODXL2Q9NZ53 605 aa29.17■■■□□ 2.26
CXXC1-216ENST00000591474 GNAI1P63096 354 aa29.16■■■□□ 2.26
CXXC1-216ENST00000591474 CALD1Q05682 793 aaKnown RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms