RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
SEH1L-208ENST00000590843 RPS8P62241 208 aaKnown RBP13.4□□□□□ -0.26
SEH1L-208ENST00000590843 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
SEH1L-208ENST00000590843 TEKT1Q969V4 418 aa13.4□□□□□ -0.26
SEH1L-208ENST00000590843 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 NOP2P46087 812 aaKnown RBP13.39□□□□□ -0.27
SEH1L-208ENST00000590843 CCDC73Q6ZRK6 1079 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 STIM1Q13586 685 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 NEBLO76041 1014 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 USPL1Q5W0Q7 1092 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 STXBP4Q6ZWJ1 553 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
SEH1L-208ENST00000590843 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 PNMA8AQ86V59 439 aaPredicted RBP13.38□□□□□ -0.27
SEH1L-208ENST00000590843 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 GRM8O00222 908 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 ZNF213O14771 459 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 PHKG2P15735 406 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 RAD50Q92878 1312 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 MCM2P49736 904 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 PRKG1Q13976 671 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
SEH1L-208ENST00000590843 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
SEH1L-208ENST00000590843 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
SEH1L-208ENST00000590843 TAF12Q16514 161 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 ZNF396Q96N95 335 aaPredicted RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 ZHX3Q9H4I2 956 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 KIF20AO95235 890 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 CEP131Q9UPN4 1083 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 CRKLP46109 303 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
SEH1L-208ENST00000590843 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
SEH1L-208ENST00000590843 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 TNNT3P45378 269 aaPredicted RBP13.36□□□□□ -0.27
SEH1L-208ENST00000590843 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 KCNQ2O43526 872 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 LRSAM1Q6UWE0 723 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 HACE1Q8IYU2 909 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 TMTC2Q8N394 836 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 PDE4CQ08493 712 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 NUTM1Q86Y26 1132 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
SEH1L-208ENST00000590843 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 BECN2A8MW95 431 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
SEH1L-208ENST00000590843 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 INSRP06213 1382 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEH1L-208ENST00000590843 KRT23Q9C075 422 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 SMARCC2Q8TAQ2 1214 aa13.35□□□□□ -0.27
SEH1L-208ENST00000590843 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
SEH1L-208ENST00000590843 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEH1L-208ENST00000590843 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
SEH1L-208ENST00000590843 ESR2Q92731 530 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 LEMD3Q9Y2U8 911 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 METP08581 1390 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
SEH1L-208ENST00000590843 CNGA1P29973 690 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 STX8Q9UNK0 236 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 ERCC6L2Q5T890 1561 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 MROH5Q6ZUA9 1318 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 UBXN2AP68543 259 aa13.34□□□□□ -0.27
SEH1L-208ENST00000590843 PTCH1Q13635 1447 aa13.33□□□□□ -0.27
SEH1L-208ENST00000590843 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
SEH1L-208ENST00000590843 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.28
SEH1L-208ENST00000590843 ABCC3O15438 1527 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 CCDC194A0A1B0GVG4 234 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 SLC12A7Q9Y666 1083 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms