RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 RNF25Q96BH1 459 aaPredicted RBP16.52■□□□□ 0.24
DNMT1-205ENST00000585920 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
DNMT1-205ENST00000585920 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-205ENST00000585920 GRM8O00222 908 aa16.51■□□□□ 0.23
DNMT1-205ENST00000585920 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
DNMT1-205ENST00000585920 TNNQ9UQP3 1299 aa16.51■□□□□ 0.23
DNMT1-205ENST00000585920 ABCC4O15439 1325 aa16.5■□□□□ 0.23
DNMT1-205ENST00000585920 PLIN1O60240 522 aa16.5■□□□□ 0.23
DNMT1-205ENST00000585920 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.231e-7■■□□□ 11.8
DNMT1-205ENST00000585920 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
DNMT1-205ENST00000585920 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
DNMT1-205ENST00000585920 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
DNMT1-205ENST00000585920 PDE8AO60658 829 aa16.49■□□□□ 0.23
DNMT1-205ENST00000585920 SRGNP10124 158 aa16.49■□□□□ 0.23
DNMT1-205ENST00000585920 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
DNMT1-205ENST00000585920 MASTLQ96GX5 879 aa16.49■□□□□ 0.23
DNMT1-205ENST00000585920 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
DNMT1-205ENST00000585920 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
DNMT1-205ENST00000585920 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 NPR1P16066 1061 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 KCNA3P22001 575 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 C3orf67Q6ZVT6 689 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
DNMT1-205ENST00000585920 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
DNMT1-205ENST00000585920 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
DNMT1-205ENST00000585920 NBPF7P0C2Y1 421 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-205ENST00000585920 CASP7P55210 303 aa16.47■□□□□ 0.23
DNMT1-205ENST00000585920 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
DNMT1-205ENST00000585920 CRY2Q49AN0 593 aa16.47■□□□□ 0.23
DNMT1-205ENST00000585920 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
DNMT1-205ENST00000585920 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
DNMT1-205ENST00000585920 RLBP1P12271 317 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
DNMT1-205ENST00000585920 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
DNMT1-205ENST00000585920 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 PLA2G12BQ9BX93 195 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
DNMT1-205ENST00000585920 UTYO14607 1347 aa16.45■□□□□ 0.22
DNMT1-205ENST00000585920 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-205ENST00000585920 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-205ENST00000585920 CTSWP56202 376 aa16.45■□□□□ 0.22
DNMT1-205ENST00000585920 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
DNMT1-205ENST00000585920 GNAI3P08754 354 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
DNMT1-205ENST00000585920 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 GPR162Q16538 588 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 TTLL11Q8NHH1 800 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 FAM212AQ96EL1 285 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-205ENST00000585920 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
DNMT1-205ENST00000585920 FOXO4P98177 505 aa16.43■□□□□ 0.22
DNMT1-205ENST00000585920 MEIS3Q99687 375 aa16.43■□□□□ 0.22
DNMT1-205ENST00000585920 CSF1RP07333 972 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 HS6ST3Q8IZP7 471 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
DNMT1-205ENST00000585920 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
DNMT1-205ENST00000585920 BBOX1O75936 387 aa16.41■□□□□ 0.22
DNMT1-205ENST00000585920 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
DNMT1-205ENST00000585920 EPHA10Q5JZY3 1008 aa16.41■□□□□ 0.22
DNMT1-205ENST00000585920 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
DNMT1-205ENST00000585920 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
DNMT1-205ENST00000585920 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
DNMT1-205ENST00000585920 SRCAPQ6ZRS2 3230 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 GRAPQ13588 217 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-205ENST00000585920 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-205ENST00000585920 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
DNMT1-205ENST00000585920 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
DNMT1-205ENST00000585920 GREM2Q9H772 168 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 SEC31BQ9NQW1 1179 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 DDX19BQ9UMR2 479 aa16.4■□□□□ 0.22
DNMT1-205ENST00000585920 C21orf2O43822 256 aa16.39■□□□□ 0.21
DNMT1-205ENST00000585920 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
DNMT1-205ENST00000585920 GNAI2P04899 355 aa16.39■□□□□ 0.21
DNMT1-205ENST00000585920 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
DNMT1-205ENST00000585920 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
DNMT1-205ENST00000585920 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
DNMT1-205ENST00000585920 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
DNMT1-205ENST00000585920 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
DNMT1-205ENST00000585920 TNRC6CQ9HCJ0 1690 aaKnown RBP16.38■□□□□ 0.21
DNMT1-205ENST00000585920 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
DNMT1-205ENST00000585920 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
DNMT1-205ENST00000585920 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
DNMT1-205ENST00000585920 ITGA6P23229 1130 aa16.38■□□□□ 0.21
DNMT1-205ENST00000585920 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms