RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 BBOX1O75936 387 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
SRSF1-208ENST00000584773 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 SF3B3Q15393 1217 aaKnown RBP23.17■■□□□ 1.3
SRSF1-208ENST00000584773 SP8Q8IXZ3 490 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 JDP2Q8WYK2 163 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 L3MBTL3Q96JM7 780 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-208ENST00000584773 DUOX1Q9NRD9 1551 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 SCN4AP35499 1836 aa23.17■■□□□ 1.3
SRSF1-208ENST00000584773 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
SRSF1-208ENST00000584773 IGKV5-2P06315 115 aa23.16■■□□□ 1.3
SRSF1-208ENST00000584773 KSR2Q6VAB6 950 aa23.16■■□□□ 1.3
SRSF1-208ENST00000584773 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
SRSF1-208ENST00000584773 CWC25Q9NXE8 425 aaPredicted RBP23.16■■□□□ 1.3
SRSF1-208ENST00000584773 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
SRSF1-208ENST00000584773 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
SRSF1-208ENST00000584773 CCDC85AQ96PX6 553 aaPredicted RBP23.15■■□□□ 1.3
SRSF1-208ENST00000584773 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
SRSF1-208ENST00000584773 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
SRSF1-208ENST00000584773 GJA3Q9Y6H8 435 aa23.15■■□□□ 1.3
SRSF1-208ENST00000584773 LTBP1Q14766 1721 aa23.14■■□□□ 1.3
SRSF1-208ENST00000584773 VAMP4O75379 141 aa23.14■■□□□ 1.3
SRSF1-208ENST00000584773 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.3
SRSF1-208ENST00000584773 MPNDQ8N594 471 aa23.14■■□□□ 1.3
SRSF1-208ENST00000584773 CHMP4AQ9BY43 222 aa23.14■■□□□ 1.3
SRSF1-208ENST00000584773 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.3
SRSF1-208ENST00000584773 CWF19L2Q2TBE0 894 aaKnown RBP23.13■■□□□ 1.29
SRSF1-208ENST00000584773 RTFDC1Q9BY42 306 aaPredicted RBP23.13■■□□□ 1.29
SRSF1-208ENST00000584773 EIF6P56537 245 aaKnown RBP23.12■■□□□ 1.29
SRSF1-208ENST00000584773 FLIIQ13045 1269 aa23.12■■□□□ 1.29
SRSF1-208ENST00000584773 NIM1KQ8IY84 436 aa23.12■■□□□ 1.29
SRSF1-208ENST00000584773 DNAJC5GQ8N7S2 189 aa23.12■■□□□ 1.29
SRSF1-208ENST00000584773 IQCA1LA6NCM1 817 aa23.11■■□□□ 1.29
SRSF1-208ENST00000584773 EAPPQ56P03 285 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-208ENST00000584773 GPC2Q8N158 579 aa23.11■■□□□ 1.29
SRSF1-208ENST00000584773 HACL1Q9UJ83 578 aa23.11■■□□□ 1.29
SRSF1-208ENST00000584773 CHADLQ6NUI6 762 aa23.1■■□□□ 1.29
SRSF1-208ENST00000584773 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
SRSF1-208ENST00000584773 NEURL1BA8MQ27 555 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 PDE8AO60658 829 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 EPHX2P34913 555 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 GPSM2P81274 684 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 GPR101Q96P66 508 aaPredicted RBP23.09■■□□□ 1.29
SRSF1-208ENST00000584773 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 ADAMTSL1Q8N6G6 1762 aa23.09■■□□□ 1.29
SRSF1-208ENST00000584773 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
SRSF1-208ENST00000584773 SCNN1DP51172 638 aa23.08■■□□□ 1.28
SRSF1-208ENST00000584773 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.28
SRSF1-208ENST00000584773 KIAA2012Q0VF49 1180 aa23.08■■□□□ 1.28
SRSF1-208ENST00000584773 NEXNQ0ZGT2 675 aa23.08■■□□□ 1.28
SRSF1-208ENST00000584773 TMC4Q7Z404 712 aa23.08■■□□□ 1.28
SRSF1-208ENST00000584773 MYH16Q9H6N6 1097 aa23.08■■□□□ 1.28
SRSF1-208ENST00000584773 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.28
SRSF1-208ENST00000584773 SPEF2Q9C093 1822 aa23.07■■□□□ 1.28
SRSF1-208ENST00000584773 MYH3P11055 1940 aa23.07■■□□□ 1.28
SRSF1-208ENST00000584773 LDHDQ86WU2 507 aa23.07■■□□□ 1.28
SRSF1-208ENST00000584773 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
SRSF1-208ENST00000584773 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
SRSF1-208ENST00000584773 EPS15P42566 896 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 CXCL9Q07325 125 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 VPS33BQ9H267 617 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 ZNRF3Q9ULT6 936 aa23.06■■□□□ 1.28
SRSF1-208ENST00000584773 YDJCA8MPS7 323 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 F6X3S4 739 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 RIMBP2O15034 1052 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 RAD17O75943 681 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 CTSWP56202 376 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 UBE3BQ7Z3V4 1068 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 CLEC11AQ9Y240 323 aa23.05■■□□□ 1.28
SRSF1-208ENST00000584773 C6orf229H3BNL8 230 aa23.04■■□□□ 1.28
SRSF1-208ENST00000584773 H7C1W4 665 aa23.03■■□□□ 1.28
SRSF1-208ENST00000584773 HSP90B1P14625 803 aaKnown RBP23.03■■□□□ 1.28
SRSF1-208ENST00000584773 GCKRQ14397 625 aa23.03■■□□□ 1.28
SRSF1-208ENST00000584773 MAP1SQ66K74 1059 aaPredicted RBP23.03■■□□□ 1.28
SRSF1-208ENST00000584773 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
SRSF1-208ENST00000584773 DBNDD1Q9H9R9 158 aa23.03■■□□□ 1.28
SRSF1-208ENST00000584773 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
SRSF1-208ENST00000584773 WASHC4Q2M389 1173 aa23.02■■□□□ 1.28
SRSF1-208ENST00000584773 TTLL11Q8NHH1 800 aa23.02■■□□□ 1.28
SRSF1-208ENST00000584773 TBC1D16Q8TBP0 767 aa23.02■■□□□ 1.28
SRSF1-208ENST00000584773 GREM2Q9H772 168 aa23.02■■□□□ 1.28
SRSF1-208ENST00000584773 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
SRSF1-208ENST00000584773 DOK7Q18PE1 504 aa23.01■■□□□ 1.27
SRSF1-208ENST00000584773 CIAPIN1Q6FI81 312 aa23.01■■□□□ 1.27
SRSF1-208ENST00000584773 PASKQ96RG2 1323 aa23■■□□□ 1.27
SRSF1-208ENST00000584773 CASP7P55210 303 aa23■■□□□ 1.27
SRSF1-208ENST00000584773 ANKRD18AQ8IVF6 992 aa23■■□□□ 1.27
SRSF1-208ENST00000584773 LINS1Q8NG48 757 aa23■■□□□ 1.27
SRSF1-208ENST00000584773 SHTN1A0MZ66 631 aa22.99■■□□□ 1.27
SRSF1-208ENST00000584773 UFL1O94874 794 aa22.99■■□□□ 1.27
SRSF1-208ENST00000584773 ITGBL1O95965 494 aaPredicted RBP22.99■■□□□ 1.27
SRSF1-208ENST00000584773 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
SRSF1-208ENST00000584773 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
SRSF1-208ENST00000584773 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
SRSF1-208ENST00000584773 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
SRSF1-208ENST00000584773 WTIPA6NIX2 430 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-208ENST00000584773 ANKIB1Q9P2G1 1089 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms