RNA–Protein interactions for RNA: ENST00000583899.5

EIF4A1-230, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-230ENST00000583899 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 GYS1P13807 737 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 SRP68Q9UHB9 627 aaKnown RBP8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 COL15A1P39059 1388 aa8.35□□□□□ -1.07
EIF4A1-230ENST00000583899 CCDC88AQ3V6T2 1871 aa8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 USP42Q9H9J4 1324 aaKnown RBP8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 SWT1Q5T5J6 900 aaKnown RBP8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 THUMPD2Q9BTF0 503 aaKnown RBP8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 NUDCQ9Y266 331 aa8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 ADGRG1Q9Y653 693 aa8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 LAMB2P55268 1798 aa8.34□□□□□ -1.07
EIF4A1-230ENST00000583899 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 APLP1P51693 650 aa8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 DDR1Q08345 913 aa8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 FLAD1Q8NFF5 587 aa8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
EIF4A1-230ENST00000583899 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.086e-10■□□□□ 10.3
EIF4A1-230ENST00000583899 POLD1P28340 1107 aa8.32□□□□□ -1.08
EIF4A1-230ENST00000583899 NFE2L2Q16236 605 aa8.32□□□□□ -1.08
EIF4A1-230ENST00000583899 MTRQ99707 1265 aa8.32□□□□□ -1.08
EIF4A1-230ENST00000583899 MMP10P09238 476 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 TEFQ10587 303 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 MIS18AQ9NYP9 233 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 CARMIL3Q8ND23 1372 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 TIAM2Q8IVF5 1701 aa8.31□□□□□ -1.08
EIF4A1-230ENST00000583899 FER1L6Q2WGJ9 1857 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 HTATSF1O43719 755 aaKnown RBP8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 TM4SF1P30408 202 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 USPL1Q5W0Q7 1092 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 CD2APQ9Y5K6 639 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 USP16Q9Y5T5 823 aa8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 DICER1Q9UPY3 1922 aaKnown RBP8.3□□□□□ -1.08
EIF4A1-230ENST00000583899 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 POLRMTO00411 1230 aaKnown RBP8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 A1BGP04217 495 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 KCNA3P22001 575 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 IL21Q9HBE4 155 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 RRP7AQ9Y3A4 280 aaKnown RBP8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 SLX4Q8IY92 1834 aa8.29□□□□□ -1.08
EIF4A1-230ENST00000583899 TAF1P21675 1872 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 GPR37O15354 613 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 DNAJB2P25686 324 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 RFC4P35249 363 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 EIF4A1P60842 406 aaKnown RBP8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 TTC5Q8N0Z6 440 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 RBM46Q8TBY0 533 aaKnown RBP8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 NARFQ9UHQ1 456 aa8.28□□□□□ -1.08
EIF4A1-230ENST00000583899 RNF40O75150 1001 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 RIPK4P57078 832 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 NFIXQ14938 502 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 TAF7Q15545 349 aaPredicted RBP8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 LRP10Q7Z4F1 713 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 WWC3Q9ULE0 1092 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 COL4A1P02462 1669 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 MAPK8IP3Q9UPT6 1336 aa8.27□□□□□ -1.09
EIF4A1-230ENST00000583899 ADCY9O60503 1353 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 RCCD1A6NED2 376 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 KRT24Q2M2I5 525 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 FAM161AQ3B820 660 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 RBM26Q5T8P6 1007 aaKnown RBP8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 TBC1D9BQ66K14 1250 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 RUNDC1Q96C34 613 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
EIF4A1-230ENST00000583899 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
EIF4A1-230ENST00000583899 DPEP1P16444 411 aa8.25□□□□□ -1.09
EIF4A1-230ENST00000583899 HIC1Q14526 733 aa8.25□□□□□ -1.09
EIF4A1-230ENST00000583899 IRX2Q9BZI1 471 aaPredicted RBP8.25□□□□□ -1.09
EIF4A1-230ENST00000583899 SENP3-EIF4A1A0A087X0R7 540 aa8.24□□□□□ -1.09
EIF4A1-230ENST00000583899 A0A0G2JLW4 131 aa8.24□□□□□ -1.09
EIF4A1-230ENST00000583899 STARD3NLO95772 234 aa8.24□□□□□ -1.09
EIF4A1-230ENST00000583899 YY1P25490 414 aa8.24□□□□□ -1.09
EIF4A1-230ENST00000583899 NEUROD2Q15784 382 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms