RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
NDEL1-214ENST00000582665 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
NDEL1-214ENST00000582665 MASTLQ96GX5 879 aa12.62□□□□□ -0.39
NDEL1-214ENST00000582665 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
NDEL1-214ENST00000582665 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
NDEL1-214ENST00000582665 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
NDEL1-214ENST00000582665 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
NDEL1-214ENST00000582665 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-214ENST00000582665 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
NDEL1-214ENST00000582665 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
NDEL1-214ENST00000582665 DDX19BQ9UMR2 479 aa12.61□□□□□ -0.39
NDEL1-214ENST00000582665 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
NDEL1-214ENST00000582665 MTX1Q13505 466 aa12.6□□□□□ -0.39
NDEL1-214ENST00000582665 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
NDEL1-214ENST00000582665 MYH3P11055 1940 aa12.6□□□□□ -0.39
NDEL1-214ENST00000582665 COL4A1P02462 1669 aa12.59□□□□□ -0.39
NDEL1-214ENST00000582665 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
NDEL1-214ENST00000582665 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
NDEL1-214ENST00000582665 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
NDEL1-214ENST00000582665 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
NDEL1-214ENST00000582665 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
NDEL1-214ENST00000582665 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
NDEL1-214ENST00000582665 GNAI2P04899 355 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
NDEL1-214ENST00000582665 CNKSR1Q969H4 720 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 RBM17Q96I25 401 aaKnown RBP12.58□□□□□ -0.4
NDEL1-214ENST00000582665 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
NDEL1-214ENST00000582665 GREM2Q9H772 168 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
NDEL1-214ENST00000582665 BBOX1O75936 387 aa12.57□□□□□ -0.4
NDEL1-214ENST00000582665 RFX5P48382 616 aaPredicted RBP12.57□□□□□ -0.4
NDEL1-214ENST00000582665 GRAPQ13588 217 aa12.57□□□□□ -0.4
NDEL1-214ENST00000582665 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
NDEL1-214ENST00000582665 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
NDEL1-214ENST00000582665 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
NDEL1-214ENST00000582665 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
NDEL1-214ENST00000582665 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
NDEL1-214ENST00000582665 GOLGB1Q14789 3259 aaKnown RBP12.56□□□□□ -0.4
NDEL1-214ENST00000582665 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
NDEL1-214ENST00000582665 SLX4Q8IY92 1834 aa12.56□□□□□ -0.4
NDEL1-214ENST00000582665 ITGA6P23229 1130 aa12.56□□□□□ -0.4
NDEL1-214ENST00000582665 RPS8P62241 208 aaKnown RBP12.56□□□□□ -0.4
NDEL1-214ENST00000582665 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
NDEL1-214ENST00000582665 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
NDEL1-214ENST00000582665 CRBNQ96SW2 442 aa12.56□□□□□ -0.4
NDEL1-214ENST00000582665 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
NDEL1-214ENST00000582665 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
NDEL1-214ENST00000582665 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
NDEL1-214ENST00000582665 CDC5LQ99459 802 aaKnown RBP12.55□□□□□ -0.4
NDEL1-214ENST00000582665 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 ANKRD18BA2A2Z9 1011 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 AAMPQ13685 434 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 POLA2Q14181 598 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
NDEL1-214ENST00000582665 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 TAF1P21675 1872 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
NDEL1-214ENST00000582665 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
NDEL1-214ENST00000582665 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
NDEL1-214ENST00000582665 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
NDEL1-214ENST00000582665 SP8Q8IXZ3 490 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
NDEL1-214ENST00000582665 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
NDEL1-214ENST00000582665 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
NDEL1-214ENST00000582665 C21orf2O43822 256 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 IGHMBP2P38935 993 aaKnown RBP12.51□□□□□ -0.41
NDEL1-214ENST00000582665 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
NDEL1-214ENST00000582665 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 CHMP3Q9Y3E7 222 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 RIPOR2Q9Y4F9 1068 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
NDEL1-214ENST00000582665 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 LDHAL6AQ6ZMR3 332 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 ATG9AQ7Z3C6 839 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-214ENST00000582665 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
NDEL1-214ENST00000582665 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
NDEL1-214ENST00000582665 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms