RNA–Protein interactions for RNA: ENST00000582126.1

KPNB1-212, Transcript of karyopherin subunit beta 1, humanhuman

TSL 5

Gene KPNB1, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-212ENST00000582126 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
KPNB1-212ENST00000582126 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
KPNB1-212ENST00000582126 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
KPNB1-212ENST00000582126 MTFR1LQ9H019 292 aa17.73■□□□□ 0.43
KPNB1-212ENST00000582126 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
KPNB1-212ENST00000582126 IGHDP01880 384 aa17.72■□□□□ 0.43
KPNB1-212ENST00000582126 SF3B3Q15393 1217 aaKnown RBP17.72■□□□□ 0.43
KPNB1-212ENST00000582126 SMC5Q8IY18 1101 aa17.72■□□□□ 0.43
KPNB1-212ENST00000582126 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
KPNB1-212ENST00000582126 NPHP1O15259 732 aa17.71■□□□□ 0.43
KPNB1-212ENST00000582126 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
KPNB1-212ENST00000582126 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
KPNB1-212ENST00000582126 CCDC152Q4G0S7 254 aa17.71■□□□□ 0.43
KPNB1-212ENST00000582126 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
KPNB1-212ENST00000582126 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
KPNB1-212ENST00000582126 CRY2Q49AN0 593 aa17.7■□□□□ 0.42
KPNB1-212ENST00000582126 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
KPNB1-212ENST00000582126 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
KPNB1-212ENST00000582126 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
KPNB1-212ENST00000582126 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
KPNB1-212ENST00000582126 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
KPNB1-212ENST00000582126 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
KPNB1-212ENST00000582126 GREM2Q9H772 168 aa17.69■□□□□ 0.42
KPNB1-212ENST00000582126 KIF13BQ9NQT8 1826 aa17.68■□□□□ 0.42
KPNB1-212ENST00000582126 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
KPNB1-212ENST00000582126 ITGA6P23229 1130 aa17.68■□□□□ 0.42
KPNB1-212ENST00000582126 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
KPNB1-212ENST00000582126 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
KPNB1-212ENST00000582126 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
KPNB1-212ENST00000582126 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
KPNB1-212ENST00000582126 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
KPNB1-212ENST00000582126 PSDA5PKW4 1024 aaPredicted RBP17.67■□□□□ 0.42
KPNB1-212ENST00000582126 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
KPNB1-212ENST00000582126 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
KPNB1-212ENST00000582126 ANKRD18BA2A2Z9 1011 aa17.66■□□□□ 0.42
KPNB1-212ENST00000582126 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
KPNB1-212ENST00000582126 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
KPNB1-212ENST00000582126 RAB11FIP3O75154 756 aa17.65■□□□□ 0.42
KPNB1-212ENST00000582126 CIAO1O76071 339 aa17.65■□□□□ 0.42
KPNB1-212ENST00000582126 POLD1P28340 1107 aa17.65■□□□□ 0.42
KPNB1-212ENST00000582126 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
KPNB1-212ENST00000582126 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
KPNB1-212ENST00000582126 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
KPNB1-212ENST00000582126 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
KPNB1-212ENST00000582126 COL4A1P02462 1669 aa17.64■□□□□ 0.42
KPNB1-212ENST00000582126 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
KPNB1-212ENST00000582126 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
KPNB1-212ENST00000582126 PDE6BP35913 854 aa17.64■□□□□ 0.41
KPNB1-212ENST00000582126 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
KPNB1-212ENST00000582126 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.41
KPNB1-212ENST00000582126 DLEC1Q9Y238 1755 aa17.63■□□□□ 0.41
KPNB1-212ENST00000582126 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
KPNB1-212ENST00000582126 KLHDC4Q8TBB5 520 aa17.63■□□□□ 0.41
KPNB1-212ENST00000582126 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
KPNB1-212ENST00000582126 EYA2O00167 538 aa17.62■□□□□ 0.41
KPNB1-212ENST00000582126 PTGER2P43116 358 aa17.62■□□□□ 0.41
KPNB1-212ENST00000582126 NUCB1Q02818 461 aa17.62■□□□□ 0.41
KPNB1-212ENST00000582126 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
KPNB1-212ENST00000582126 KIF1BPQ96EK5 621 aa17.62■□□□□ 0.41
KPNB1-212ENST00000582126 LRRC37AA6NMS7 1700 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 SRGNP10124 158 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 NPR1P16066 1061 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 IGHMBP2P38935 993 aaKnown RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.414e-8■□□□□ 11.2
KPNB1-212ENST00000582126 GRAPQ13588 217 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 ATG9AQ7Z3C6 839 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
KPNB1-212ENST00000582126 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
KPNB1-212ENST00000582126 ANKRD18AQ8IVF6 992 aa17.6■□□□□ 0.41
KPNB1-212ENST00000582126 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
KPNB1-212ENST00000582126 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
KPNB1-212ENST00000582126 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
KPNB1-212ENST00000582126 SIL1Q9H173 461 aa17.6■□□□□ 0.41
KPNB1-212ENST00000582126 A0A1B0GUL6 1792 aa17.6■□□□□ 0.41
KPNB1-212ENST00000582126 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
KPNB1-212ENST00000582126 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
KPNB1-212ENST00000582126 LDHAL6AQ6ZMR3 332 aa17.59■□□□□ 0.41
KPNB1-212ENST00000582126 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
KPNB1-212ENST00000582126 CELF1Q92879 486 aaKnown RBP17.59■□□□□ 0.41
KPNB1-212ENST00000582126 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
KPNB1-212ENST00000582126 RIPOR2Q9Y4F9 1068 aa17.59■□□□□ 0.41
KPNB1-212ENST00000582126 SASH1O94885 1247 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
KPNB1-212ENST00000582126 STYK1Q6J9G0 422 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 MPHOSPH8Q99549 860 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
KPNB1-212ENST00000582126 SPON1Q9HCB6 807 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 TAF1P21675 1872 aa17.58■□□□□ 0.4
KPNB1-212ENST00000582126 ZNF609O15014 1411 aa17.57■□□□□ 0.4
KPNB1-212ENST00000582126 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
KPNB1-212ENST00000582126 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
KPNB1-212ENST00000582126 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
KPNB1-212ENST00000582126 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms