RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 APAF1O14727 1248 aa15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 CXCL9Q07325 125 aa15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 SP8Q8IXZ3 490 aa15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 MPNDQ8N594 471 aa15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 SUPT20HQ8NEM7 779 aa15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 ABT1Q9ULW3 272 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-223ENST00000582114 FOXN1O15353 648 aa15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 RAD17O75943 681 aa15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 HOXB7P09629 217 aa15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 ISCA1Q9BUE6 129 aa15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 ZNRF3Q9ULT6 936 aa15.11■□□□□ 0.01
CDK5RAP3-223ENST00000582114 TRAF5O00463 557 aa15.1■□□□□ 0.01
CDK5RAP3-223ENST00000582114 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-223ENST00000582114 HYPKQ9NX55 129 aa15.1■□□□□ 0.01
CDK5RAP3-223ENST00000582114 GPRC5DQ9NZD1 345 aa15.1■□□□□ 0.01
CDK5RAP3-223ENST00000582114 COL4A1P02462 1669 aa15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 KIAA2012Q0VF49 1180 aa15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DEFB115Q30KQ5 88 aa15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 CIAPIN1Q6FI81 312 aa15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 PAXIP1Q6ZW49 1069 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 USP50Q70EL3 339 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 RIC3Q7Z5B4 369 aa15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DUOX1Q9NRD9 1551 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 ZNF853P0CG23 659 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 GRM1Q13255 1194 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 AIDAQ96BJ3 306 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 VPS33BQ9H267 617 aa15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 ADARB2Q9NS39 739 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-223ENST00000582114 SHTN1A0MZ66 631 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 RASSF10A6NK89 507 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 YDJCA8MPS7 323 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 RIMBP2O15034 1052 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 GOLGA2Q08379 1002 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 MYD88Q99836 296 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 IFT57Q9NWB7 429 aa15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-223ENST00000582114 GNAI1P63096 354 aa15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 SF3B3Q15393 1217 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 DBNDD1Q9H9R9 158 aa15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
CDK5RAP3-223ENST00000582114 C6orf229H3BNL8 230 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 GPSM2P81274 684 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 TNIP1Q15025 636 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 CST9Q5W186 159 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 TMC4Q7Z404 712 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 TRPM4Q8TD43 1214 aa15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-223ENST00000582114 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 DOK7Q18PE1 504 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 WASHC4Q2M389 1173 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 CCDC184Q52MB2 194 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 CYP4F22Q6NT55 531 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 ZBTB38Q8NAP3 1195 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 GLIS2Q9BZE0 524 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 ZNF408Q9H9D4 720 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 SEC31BQ9NQW1 1179 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 WBP1LQ9NX94 342 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 POLLQ9UGP5 575 aa15.04■□□□□ -0
CDK5RAP3-223ENST00000582114 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 PSMD14O00487 310 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 CELF2O95319 508 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 LBX1P52954 281 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 TRIM28Q13263 835 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 MICALL2Q8IY33 904 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 TSPYL6Q8N831 410 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 CAPNS2Q96L46 248 aa15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 CNOT7Q9UIV1 285 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-223ENST00000582114 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-223ENST00000582114 KCNQ5Q9NR82 932 aa15.02■□□□□ -0
CDK5RAP3-223ENST00000582114 H7C1D1 291 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ECE2O60344 883 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CCDC30Q5VVM6 783 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 DLK2Q6UY11 383 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 SAMD7Q7Z3H4 446 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 TBC1D16Q8TBP0 767 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 TLL2Q9Y6L7 1015 aa15.01□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CDHR2Q9BYE9 1310 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 AOC2O75106 756 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 EGFRP00533 1210 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 HSPA8P11142 646 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 TBC1D10BQ4KMP7 808 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 RBM26Q5T8P6 1007 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CCDC191Q8NCU4 936 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 EYA3Q99504 573 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms