RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ABCC12Q96J65 1359 aa14.1□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CCDC152Q4G0S7 254 aa14.1□□□□□ -0.15
CDK5RAP3-210ENST00000578733 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CD2APQ9Y5K6 639 aa14.1□□□□□ -0.15
CDK5RAP3-210ENST00000578733 H0YIN7 160 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CASP7P55210 303 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CTSWP56202 376 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 TGFB2P61812 414 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 JARID2Q92833 1246 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 SUCLG2Q96I99 432 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 LRRFIP2Q9Y608 721 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 TAF1P21675 1872 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
CDK5RAP3-210ENST00000578733 DDX46Q7L014 1031 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 SF3B3Q15393 1217 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 RTL9Q8NET4 1388 aa14.07□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ANKRD18BA2A2Z9 1011 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 HMMRO75330 724 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 NPR1P16066 1061 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 IRX6P78412 446 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CCDC57Q2TAC2 916 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 LMBR1LQ6UX01 489 aa14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CDC5LQ99459 802 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CSF1RP07333 972 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 FOXO4P98177 505 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 RABL6Q3YEC7 729 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CRY2Q49AN0 593 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 STYK1Q6J9G0 422 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 TTLL11Q8NHH1 800 aa14.05□□□□□ -0.16
CDK5RAP3-210ENST00000578733 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 SRGNP10124 158 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 IGHMBP2P38935 993 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 TMC4Q7Z404 712 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 EXOC6Q8TAG9 804 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CNKSR1Q969H4 720 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.161e-17■■□□□ 13.6
CDK5RAP3-210ENST00000578733 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ITGA6P23229 1130 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 MTX1Q13505 466 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ANKRD44Q8N8A2 993 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 KAZALD1Q96I82 304 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CCDC85AQ96PX6 553 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 GREM2Q9H772 168 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
CDK5RAP3-210ENST00000578733 LRRC37AA6NMS7 1700 aa14.02□□□□□ -0.16
CDK5RAP3-210ENST00000578733 ATP8B2P98198 1209 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 GRAPQ13588 217 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 EPHA10Q5JZY3 1008 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CEP85Q6P2H3 762 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 MPHOSPH8Q99549 860 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PIM2Q9P1W9 311 aa14.02□□□□□ -0.17
CDK5RAP3-210ENST00000578733 BBOX1O75936 387 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 DPEP1P16444 411 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CHRNA5P30532 468 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 APLP1P51693 650 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
CDK5RAP3-210ENST00000578733 A0A0G2JLW4 131 aa14□□□□□ -0.17
CDK5RAP3-210ENST00000578733 HSP90AB4PQ58FF6 505 aa14□□□□□ -0.17
CDK5RAP3-210ENST00000578733 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-210ENST00000578733 FBXO3Q9UK99 471 aa14□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PPEF1O14829 653 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 DALRD3Q5D0E6 543 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 SSH3Q8TE77 659 aa13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 RWDD1Q9H446 243 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 G3BP1Q13283 466 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 POLA2Q14181 598 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
CDK5RAP3-210ENST00000578733 CC2D2BQ6DHV5 1058 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms