RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
CTC1-204ENST00000578441 EPS15P42566 896 aa13.18□□□□□ -0.3
CTC1-204ENST00000578441 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
CTC1-204ENST00000578441 AOC3Q16853 763 aa13.18□□□□□ -0.3
CTC1-204ENST00000578441 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
CTC1-204ENST00000578441 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
CTC1-204ENST00000578441 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
CTC1-204ENST00000578441 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
CTC1-204ENST00000578441 GRAPQ13588 217 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 TNIP1Q15025 636 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 MPNDQ8N594 471 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
CTC1-204ENST00000578441 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
CTC1-204ENST00000578441 CAPNS2Q96L46 248 aa13.17□□□□□ -0.3
CTC1-204ENST00000578441 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
CTC1-204ENST00000578441 ANXA1P04083 346 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 CXCL9Q07325 125 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
CTC1-204ENST00000578441 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTC1-204ENST00000578441 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
CTC1-204ENST00000578441 PGAP2Q9UHJ9 254 aa13.16□□□□□ -0.3
CTC1-204ENST00000578441 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
CTC1-204ENST00000578441 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
CTC1-204ENST00000578441 TRIM28Q13263 835 aaKnown RBP13.15□□□□□ -0.3
CTC1-204ENST00000578441 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
CTC1-204ENST00000578441 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
CTC1-204ENST00000578441 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CTC1-204ENST00000578441 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
CTC1-204ENST00000578441 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
CTC1-204ENST00000578441 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
CTC1-204ENST00000578441 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
CTC1-204ENST00000578441 CST9Q5W186 159 aa13.13□□□□□ -0.31
CTC1-204ENST00000578441 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
CTC1-204ENST00000578441 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
CTC1-204ENST00000578441 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 DPF2Q92785 391 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
CTC1-204ENST00000578441 TAF1P21675 1872 aa13.12□□□□□ -0.31
CTC1-204ENST00000578441 H7C1D1 291 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 TRAF5O00463 557 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
CTC1-204ENST00000578441 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 CYP4F22Q6NT55 531 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 MCOLN1Q9GZU1 580 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
CTC1-204ENST00000578441 RAD17O75943 681 aa13.1□□□□□ -0.31
CTC1-204ENST00000578441 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
CTC1-204ENST00000578441 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
CTC1-204ENST00000578441 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
CTC1-204ENST00000578441 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
CTC1-204ENST00000578441 EYA3Q99504 573 aa13.1□□□□□ -0.31
CTC1-204ENST00000578441 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
CTC1-204ENST00000578441 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
CTC1-204ENST00000578441 YDJCA8MPS7 323 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 CELF2O95319 508 aaKnown RBP13.09□□□□□ -0.31
CTC1-204ENST00000578441 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 GNAI1P63096 354 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
CTC1-204ENST00000578441 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
CTC1-204ENST00000578441 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
CTC1-204ENST00000578441 ZNF609O15014 1411 aa13.08□□□□□ -0.32
CTC1-204ENST00000578441 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CTC1-204ENST00000578441 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
CTC1-204ENST00000578441 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
CTC1-204ENST00000578441 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTC1-204ENST00000578441 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
CTC1-204ENST00000578441 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
CTC1-204ENST00000578441 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
CTC1-204ENST00000578441 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
CTC1-204ENST00000578441 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
CTC1-204ENST00000578441 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
CTC1-204ENST00000578441 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
CTC1-204ENST00000578441 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
CTC1-204ENST00000578441 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 PSMD14O00487 310 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 NOGQ13253 232 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
CTC1-204ENST00000578441 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 PSME4Q14997 1843 aa13.06□□□□□ -0.32
CTC1-204ENST00000578441 ECE2O60344 883 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 AOC2O75106 756 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms