RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 DMRTB1Q96MA1 342 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 FAM129BQ96TA1 746 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 OXCT2Q9BYC2 517 aaPredicted RBP3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 GGNBP2Q9H3C7 697 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 GDF2Q9UK05 429 aaPredicted RBP3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 SIN3BO75182 1162 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 RARAP10276 462 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 KRT25Q7Z3Z0 450 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 RAB44Q7Z6P3 723 aaPredicted RBP3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 GOLGA6L1Q8N7Z2 621 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 TMC1Q8TDI8 760 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 ELP3Q9H9T3 547 aa3.96□□□□□ -1.78
PTP4A1-204ENST00000578299 WIPF1O43516 503 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 NEFLP07196 543 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 PSAPP07602 524 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 TARSP26639 723 aaKnown RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 SOX18P35713 384 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 PCBP4P57723 403 aaKnown RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 PCSK7Q16549 785 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 TTC39BQ5VTQ0 682 aaPredicted RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 SLCO4C1Q6ZQN7 724 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 DHX32Q7L7V1 743 aaKnown RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 TMC7Q7Z402 723 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 TNFRSF25Q93038 417 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 ASB16Q96NS5 453 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 LRRC4BQ9NT99 713 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 ABI2Q9NYB9 513 aaPredicted RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 TLR7Q9NYK1 1049 aaKnown RBP3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 ZFATQ9P243 1243 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 GGA1Q9UJY5 639 aa3.95□□□□□ -1.78
PTP4A1-204ENST00000578299 A6NHS1 94 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 NEURL1BA8MQ27 555 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 ADARB2-AS1A8MUL3 147 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 MMP20O60882 483 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 TNFRSF21O75509 655 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 BCRP11274 1271 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 HOXD8P13378 290 aaPredicted RBP3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 ERCC3P19447 782 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 NRLP54845 237 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 PLAURQ03405 335 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 OR13H1Q8NG92 308 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 TRPM4Q8TD43 1214 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 SNX29Q8TEQ0 813 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 PMEPA1Q969W9 287 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 ACDQ96AP0 544 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 ALKBH8Q96BT7 664 aaKnown RBP3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 UBE2OQ9C0C9 1292 aaKnown RBP3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 TMEM63CQ9P1W3 806 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 KLF15Q9UIH9 416 aa3.94□□□□□ -1.78
PTP4A1-204ENST00000578299 GPR182O15218 404 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 TREHO43280 583 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 PHACTR2O75167 634 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 IGHA2P01877 340 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 EPXP11678 715 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 ALAS2P22557 587 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 ADH7P40394 386 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 MFAP1P55081 439 aaKnown RBP3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 GPLD1P80108 840 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 PLCB3Q01970 1234 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 MAP3K10Q02779 954 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 DSC3Q14574 896 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 FCHSD1Q86WN1 690 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 MDFIQ99750 246 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 IGFLR1Q9H665 355 aa3.93□□□□□ -1.78
PTP4A1-204ENST00000578299 ELOA3CA0A087WX78 387 aaPredicted RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ANKRD33BA6NCL7 494 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ELOA3DA6NLF2 546 aaPredicted RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 PHF20L1A8MW92 1017 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 OIP5O43482 229 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 CELA2BP08218 269 aaPredicted RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 CES1P23141 567 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 TBC1D8BQ0IIM8 1120 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 HYAL2Q12891 473 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 COL19A1Q14993 1142 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ELOA3BQ3SY89 546 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 LYPD4Q6UWN0 246 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 DNAJC14Q6Y2X3 702 aaPredicted RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 C1orf127Q8N9H9 656 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 GALNT6Q8NCL4 622 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ELOA3Q8NG57 546 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 EDARADDQ8WWZ3 215 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 NIF3L1Q9GZT8 377 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 DNAJC25Q9H1X3 360 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ZFYVE28Q9HCC9 887 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ENAMQ9NRM1 1142 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 DNAJB12Q9NXW2 375 aaKnown RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 CNTN3Q9P232 1028 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 FOXD3Q9UJU5 478 aaPredicted RBP3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 SLC6A14Q9UN76 642 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 AMOTL2Q9Y2J4 779 aa3.92□□□□□ -1.78
PTP4A1-204ENST00000578299 ZBTB42B2RXF5 422 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 EIF1AYO14602 144 aaKnown RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 CPNE3O75131 537 aaKnown RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 INSM1Q01101 510 aaPredicted RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 FMR1Q06787 632 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 ORC1Q13415 861 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 ZNF385CQ66K41 422 aaPredicted RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 KANK3Q6NY19 840 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 C1orf229Q6ZS94 237 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms