RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
SNORD3B-1-201ENST00000577988 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
SNORD3B-1-201ENST00000577988 UTYO14607 1347 aa17.55■□□□□ 0.4
SNORD3B-1-201ENST00000577988 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
SNORD3B-1-201ENST00000577988 BCAR3O75815 825 aa17.55■□□□□ 0.4
SNORD3B-1-201ENST00000577988 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
SNORD3B-1-201ENST00000577988 ABCC4O15439 1325 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 CTSWP56202 376 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 TTLL11Q8NHH1 800 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
SNORD3B-1-201ENST00000577988 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
SNORD3B-1-201ENST00000577988 SBF1O95248 1867 aa17.53■□□□□ 0.4
SNORD3B-1-201ENST00000577988 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
SNORD3B-1-201ENST00000577988 CSF1RP07333 972 aa17.53■□□□□ 0.4
SNORD3B-1-201ENST00000577988 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
SNORD3B-1-201ENST00000577988 YY1P25490 414 aa17.52■□□□□ 0.4
SNORD3B-1-201ENST00000577988 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
SNORD3B-1-201ENST00000577988 CDC5LQ99459 802 aaKnown RBP17.52■□□□□ 0.4
SNORD3B-1-201ENST00000577988 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.4
SNORD3B-1-201ENST00000577988 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
SNORD3B-1-201ENST00000577988 NFKBIEO00221 500 aa17.51■□□□□ 0.39
SNORD3B-1-201ENST00000577988 LMNB1P20700 586 aa17.51■□□□□ 0.39
SNORD3B-1-201ENST00000577988 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
SNORD3B-1-201ENST00000577988 PSMD1Q99460 953 aa17.51■□□□□ 0.39
SNORD3B-1-201ENST00000577988 USP44Q9H0E7 712 aa17.51■□□□□ 0.39
SNORD3B-1-201ENST00000577988 MS4A1P11836 297 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 TRIM27P14373 513 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.393e-22■■■■■ 129.2
SNORD3B-1-201ENST00000577988 VPS33BQ9H267 617 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 TAF1P21675 1872 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 CCDC88AQ3V6T2 1871 aa17.5■□□□□ 0.39
SNORD3B-1-201ENST00000577988 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 FOXO4P98177 505 aa17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 ANKRD18AQ8IVF6 992 aa17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
SNORD3B-1-201ENST00000577988 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
SNORD3B-1-201ENST00000577988 GREM2Q9H772 168 aa17.48■□□□□ 0.39
SNORD3B-1-201ENST00000577988 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
SNORD3B-1-201ENST00000577988 DICER1Q9UPY3 1922 aaKnown RBP17.48■□□□□ 0.39
SNORD3B-1-201ENST00000577988 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
SNORD3B-1-201ENST00000577988 RASSF7Q02833 373 aa17.47■□□□□ 0.39
SNORD3B-1-201ENST00000577988 MPNDQ8N594 471 aa17.47■□□□□ 0.39
SNORD3B-1-201ENST00000577988 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
SNORD3B-1-201ENST00000577988 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
SNORD3B-1-201ENST00000577988 ANKRD18BA2A2Z9 1011 aa17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 GNAI3P08754 354 aa17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 ITGA6P23229 1130 aa17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 RABL6Q3YEC7 729 aaPredicted RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 LMBR1LQ6UX01 489 aa17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 SUCLG2Q96I99 432 aa17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
SNORD3B-1-201ENST00000577988 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 KAZALD1Q96I82 304 aa17.45■□□□□ 0.38
SNORD3B-1-201ENST00000577988 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
SNORD3B-1-201ENST00000577988 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
SNORD3B-1-201ENST00000577988 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
SNORD3B-1-201ENST00000577988 PRELPP51888 382 aa17.42■□□□□ 0.38
SNORD3B-1-201ENST00000577988 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
SNORD3B-1-201ENST00000577988 ZNF277Q9NRM2 450 aaPredicted RBP17.42■□□□□ 0.38
SNORD3B-1-201ENST00000577988 TAF7LQ5H9L4 462 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 EYA3Q99504 573 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 ANKRD2Q9GZV1 360 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 XDHP47989 1333 aa17.41■□□□□ 0.38
SNORD3B-1-201ENST00000577988 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 GPSM2P81274 684 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 MEIS3Q99687 375 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
SNORD3B-1-201ENST00000577988 UTRNP46939 3433 aa17.39■□□□□ 0.37
SNORD3B-1-201ENST00000577988 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms