RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.8
HCFC1R1-208ENST00000575214 UBE3BQ7Z3V4 1068 aa26.33■■□□□ 1.8
HCFC1R1-208ENST00000575214 ATP6V0A2Q9Y487 856 aa26.33■■□□□ 1.8
HCFC1R1-208ENST00000575214 CCDC152Q4G0S7 254 aa26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 GRIPAP1Q4V328 841 aa26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 BEND3Q5T5X7 828 aa26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 SLC4A10Q6U841 1118 aa26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 ZNF277Q9NRM2 450 aaPredicted RBP26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
HCFC1R1-208ENST00000575214 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
HCFC1R1-208ENST00000575214 H7C1W4 665 aa26.31■■□□□ 1.8
HCFC1R1-208ENST00000575214 PSMD1Q99460 953 aa26.31■■□□□ 1.8
HCFC1R1-208ENST00000575214 CELF1Q92879 486 aaKnown RBP26.3■■□□□ 1.8
HCFC1R1-208ENST00000575214 CCDC85AQ96PX6 553 aaPredicted RBP26.3■■□□□ 1.8
HCFC1R1-208ENST00000575214 PTPRCP08575 1304 aa26.3■■□□□ 1.8
HCFC1R1-208ENST00000575214 CTSWP56202 376 aa26.29■■□□□ 1.8
HCFC1R1-208ENST00000575214 TMC4Q7Z404 712 aa26.29■■□□□ 1.8
HCFC1R1-208ENST00000575214 SP8Q8IXZ3 490 aa26.29■■□□□ 1.8
HCFC1R1-208ENST00000575214 CCDC88AQ3V6T2 1871 aa26.28■■□□□ 1.8
HCFC1R1-208ENST00000575214 TIAM2Q8IVF5 1701 aa26.28■■□□□ 1.8
HCFC1R1-208ENST00000575214 IARSP41252 1262 aaKnown RBP26.27■■□□□ 1.8
HCFC1R1-208ENST00000575214 SEC31BQ9NQW1 1179 aa26.27■■□□□ 1.8
HCFC1R1-208ENST00000575214 KDM2BQ8NHM5 1336 aa26.27■■□□□ 1.8
HCFC1R1-208ENST00000575214 SRCIN1Q9C0H9 1055 aa26.26■■□□□ 1.79
HCFC1R1-208ENST00000575214 CASP7P55210 303 aa26.25■■□□□ 1.79
HCFC1R1-208ENST00000575214 RPS8P62241 208 aaKnown RBP26.25■■□□□ 1.79
HCFC1R1-208ENST00000575214 DPP8Q6V1X1 898 aaPredicted RBP26.25■■□□□ 1.79
HCFC1R1-208ENST00000575214 ZBED9Q6R2W3 1325 aa26.25■■□□□ 1.79
HCFC1R1-208ENST00000575214 TAF1P21675 1872 aa26.25■■□□□ 1.79
HCFC1R1-208ENST00000575214 GLTPD2A6NH11 291 aa26.24■■□□□ 1.79
HCFC1R1-208ENST00000575214 ALDH1L1O75891 902 aa26.24■■□□□ 1.79
HCFC1R1-208ENST00000575214 MPNDQ8N594 471 aa26.24■■□□□ 1.79
HCFC1R1-208ENST00000575214 TTLL11Q8NHH1 800 aa26.24■■□□□ 1.79
HCFC1R1-208ENST00000575214 PLA2G12BQ9BX93 195 aa26.23■■□□□ 1.79
HCFC1R1-208ENST00000575214 NMRK2Q9NPI5 230 aa26.23■■□□□ 1.79
HCFC1R1-208ENST00000575214 DICER1Q9UPY3 1922 aaKnown RBP26.23■■□□□ 1.79
HCFC1R1-208ENST00000575214 RARSP54136 660 aaKnown RBP26.22■■□□□ 1.79
HCFC1R1-208ENST00000575214 DPY19L2Q6NUT2 758 aa26.22■■□□□ 1.79
HCFC1R1-208ENST00000575214 C9orf78Q9NZ63 289 aaPredicted RBP26.22■■□□□ 1.79
HCFC1R1-208ENST00000575214 COL4A1P02462 1669 aa26.22■■□□□ 1.79
HCFC1R1-208ENST00000575214 GRM8O00222 908 aa26.21■■□□□ 1.79
HCFC1R1-208ENST00000575214 ANKRD18AQ8IVF6 992 aa26.21■■□□□ 1.79
HCFC1R1-208ENST00000575214 SUPT20HQ8NEM7 779 aa26.21■■□□□ 1.79
HCFC1R1-208ENST00000575214 JDP2Q8WYK2 163 aa26.21■■□□□ 1.79
HCFC1R1-208ENST00000575214 GREM2Q9H772 168 aa26.21■■□□□ 1.79
HCFC1R1-208ENST00000575214 C1QTNF8P60827 252 aa26.2■■□□□ 1.79
HCFC1R1-208ENST00000575214 LARGE2Q8N3Y3 721 aa26.2■■□□□ 1.79
HCFC1R1-208ENST00000575214 CDC5LQ99459 802 aaKnown RBP26.2■■□□□ 1.79
HCFC1R1-208ENST00000575214 KIF3CO14782 793 aa26.2■■□□□ 1.78
HCFC1R1-208ENST00000575214 PPIP5K2O43314 1243 aa26.2■■□□□ 1.78
HCFC1R1-208ENST00000575214 RTFDC1Q9BY42 306 aaPredicted RBP26.2■■□□□ 1.78
HCFC1R1-208ENST00000575214 NOB1Q9ULX3 412 aaKnown RBP26.2■■□□□ 1.78
HCFC1R1-208ENST00000575214 RTL9Q8NET4 1388 aa26.19■■□□□ 1.78
HCFC1R1-208ENST00000575214 BRPF1P55201 1214 aaPredicted RBP26.19■■□□□ 1.78
HCFC1R1-208ENST00000575214 RRAGCQ9HB90 399 aa26.19■■□□□ 1.78
HCFC1R1-208ENST00000575214 NSFL1CQ9UNZ2 370 aaKnown RBP26.19■■□□□ 1.78
HCFC1R1-208ENST00000575214 LRRC37AA6NMS7 1700 aa26.18■■□□□ 1.78
HCFC1R1-208ENST00000575214 AOC3Q16853 763 aa26.18■■□□□ 1.78
HCFC1R1-208ENST00000575214 MYH3P11055 1940 aa26.18■■□□□ 1.78
HCFC1R1-208ENST00000575214 GPSM2P81274 684 aa26.17■■□□□ 1.78
HCFC1R1-208ENST00000575214 FAM161AQ3B820 660 aa26.17■■□□□ 1.78
HCFC1R1-208ENST00000575214 VPS33BQ9H267 617 aa26.17■■□□□ 1.78
HCFC1R1-208ENST00000575214 KIF16BQ96L93 1317 aa26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 CSF1RP07333 972 aa26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 ITGA6P23229 1130 aa26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 NIM1KQ8IY84 436 aa26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 API5Q9BZZ5 524 aaKnown RBP26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 CHMP3Q9Y3E7 222 aa26.16■■□□□ 1.78
HCFC1R1-208ENST00000575214 ZNF541Q9H0D2 1346 aa26.15■■□□□ 1.78
HCFC1R1-208ENST00000575214 FZD9O00144 591 aa26.15■■□□□ 1.78
HCFC1R1-208ENST00000575214 DDNO94850 711 aaPredicted RBP26.15■■□□□ 1.78
HCFC1R1-208ENST00000575214 COL4A5P29400 1685 aa26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 C6orf229H3BNL8 230 aa26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 IGHMBP2P38935 993 aaKnown RBP26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 FOXO4P98177 505 aa26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 C16orf71Q8IYS4 520 aaPredicted RBP26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 ANKIB1Q9P2G1 1089 aa26.14■■□□□ 1.78
HCFC1R1-208ENST00000575214 NBPF7P0C2Y1 421 aaPredicted RBP26.13■■□□□ 1.77
HCFC1R1-208ENST00000575214 EIF6P56537 245 aaKnown RBP26.13■■□□□ 1.77
HCFC1R1-208ENST00000575214 KIAA2012Q0VF49 1180 aa26.13■■□□□ 1.77
HCFC1R1-208ENST00000575214 BSDC1Q9NW68 430 aaPredicted RBP26.13■■□□□ 1.77
HCFC1R1-208ENST00000575214 DUOX1Q9NRD9 1551 aa26.13■■□□□ 1.77
HCFC1R1-208ENST00000575214 EPHA10Q5JZY3 1008 aa26.12■■□□□ 1.77
HCFC1R1-208ENST00000575214 LMBR1LQ6UX01 489 aa26.12■■□□□ 1.77
HCFC1R1-208ENST00000575214 SUCLG2Q96I99 432 aa26.12■■□□□ 1.77
HCFC1R1-208ENST00000575214 POLLQ9UGP5 575 aa26.12■■□□□ 1.77
HCFC1R1-208ENST00000575214 ANKRD18BA2A2Z9 1011 aa26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 BCAR3O75815 825 aa26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 VEGFAP15692 232 aaPredicted RBP26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 WASHC4Q2M389 1173 aa26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 PODXL2Q9NZ53 605 aa26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 UTYO14607 1347 aa26.11■■□□□ 1.77
HCFC1R1-208ENST00000575214 UFL1O94874 794 aa26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 CCT4P50991 539 aaKnown RBP26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 IFIT5Q13325 482 aaKnown RBP26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 TBC1D16Q8TBP0 767 aa26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 EYA3Q99504 573 aa26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 MPHOSPH8Q99549 860 aa26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 GGA1Q9UJY5 639 aa26.1■■□□□ 1.77
HCFC1R1-208ENST00000575214 ARHGAP45Q92619 1136 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms