RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
PRPF8-208ENST00000573716 NOGQ13253 232 aa16.15■□□□□ 0.18
PRPF8-208ENST00000573716 TNIP1Q15025 636 aa16.15■□□□□ 0.18
PRPF8-208ENST00000573716 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
PRPF8-208ENST00000573716 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
PRPF8-208ENST00000573716 SHTN1A0MZ66 631 aa16.14■□□□□ 0.17
PRPF8-208ENST00000573716 H7C1D1 291 aa16.14■□□□□ 0.17
PRPF8-208ENST00000573716 SOX10P56693 466 aa16.14■□□□□ 0.17
PRPF8-208ENST00000573716 DLK2Q6UY11 383 aa16.14■□□□□ 0.17
PRPF8-208ENST00000573716 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
PRPF8-208ENST00000573716 MPNDQ8N594 471 aa16.14■□□□□ 0.17
PRPF8-208ENST00000573716 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
PRPF8-208ENST00000573716 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
PRPF8-208ENST00000573716 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
PRPF8-208ENST00000573716 LAMB2P55268 1798 aa16.13■□□□□ 0.17
PRPF8-208ENST00000573716 TNRC18O15417 2968 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-208ENST00000573716 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
PRPF8-208ENST00000573716 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
PRPF8-208ENST00000573716 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
PRPF8-208ENST00000573716 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
PRPF8-208ENST00000573716 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
PRPF8-208ENST00000573716 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
PRPF8-208ENST00000573716 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
PRPF8-208ENST00000573716 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
PRPF8-208ENST00000573716 PPP2R1AP30153 589 aa16.12■□□□□ 0.17
PRPF8-208ENST00000573716 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
PRPF8-208ENST00000573716 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
PRPF8-208ENST00000573716 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
PRPF8-208ENST00000573716 TAF1P21675 1872 aa16.12■□□□□ 0.17
PRPF8-208ENST00000573716 BBOX1O75936 387 aa16.11■□□□□ 0.17
PRPF8-208ENST00000573716 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
PRPF8-208ENST00000573716 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
PRPF8-208ENST00000573716 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-208ENST00000573716 POLR2AP24928 1970 aaKnown RBP16.1■□□□□ 0.17
PRPF8-208ENST00000573716 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
PRPF8-208ENST00000573716 TBC1D10BQ4KMP7 808 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-208ENST00000573716 RBM26Q5T8P6 1007 aaKnown RBP16.1■□□□□ 0.17
PRPF8-208ENST00000573716 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
PRPF8-208ENST00000573716 SAMD7Q7Z3H4 446 aa16.1■□□□□ 0.17
PRPF8-208ENST00000573716 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
PRPF8-208ENST00000573716 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
PRPF8-208ENST00000573716 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 ANKRD36CQ5JPF3 1778 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 TRPA1O75762 1119 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 ANXA1P04083 346 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 C2orf69Q8N8R5 385 aa16.09■□□□□ 0.17
PRPF8-208ENST00000573716 GBA2Q9HCG7 927 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-208ENST00000573716 ADM5C9JUS6 153 aa16.08■□□□□ 0.16
PRPF8-208ENST00000573716 ZNF157P51786 506 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-208ENST00000573716 KIF23Q02241 960 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-208ENST00000573716 PSMD14O00487 310 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
PRPF8-208ENST00000573716 GRAPQ13588 217 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-208ENST00000573716 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
PRPF8-208ENST00000573716 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
PRPF8-208ENST00000573716 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
PRPF8-208ENST00000573716 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-208ENST00000573716 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 RNF186Q9NXI6 227 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 SAGE1Q9NXZ1 904 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
PRPF8-208ENST00000573716 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
PRPF8-208ENST00000573716 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
PRPF8-208ENST00000573716 EGFRP00533 1210 aa16.05■□□□□ 0.16
PRPF8-208ENST00000573716 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
PRPF8-208ENST00000573716 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
PRPF8-208ENST00000573716 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
PRPF8-208ENST00000573716 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
PRPF8-208ENST00000573716 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
PRPF8-208ENST00000573716 DPF2Q92785 391 aa16.04■□□□□ 0.16
PRPF8-208ENST00000573716 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
PRPF8-208ENST00000573716 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
PRPF8-208ENST00000573716 PDIA6Q15084 440 aa16.03■□□□□ 0.16
PRPF8-208ENST00000573716 DOK7Q18PE1 504 aa16.03■□□□□ 0.16
PRPF8-208ENST00000573716 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
PRPF8-208ENST00000573716 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
PRPF8-208ENST00000573716 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 ECE2O60344 883 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 TMC4Q7Z404 712 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 LRP10Q7Z4F1 713 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 CTU1Q7Z7A3 348 aaKnown RBP16.02■□□□□ 0.16
PRPF8-208ENST00000573716 SULF1Q8IWU6 871 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 KCNQ5Q9NR82 932 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
PRPF8-208ENST00000573716 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
PRPF8-208ENST00000573716 PRPF38BQ5VTL8 546 aaKnown RBP16.01■□□□□ 0.15
PRPF8-208ENST00000573716 CSRNP1Q96S65 589 aa16.01■□□□□ 0.15
PRPF8-208ENST00000573716 DDX60Q8IY21 1712 aaKnown RBP16.01■□□□□ 0.15
PRPF8-208ENST00000573716 ASTN2O75129 1339 aaPredicted RBP16■□□□□ 0.15
PRPF8-208ENST00000573716 G3V3G9 751 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 SLC10A3P09131 477 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms