RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 MRS2Q9HD23 443 aa26.71■■□□□ 1.87
LITAF-205ENST00000570904 SUPT20HQ8NEM7 779 aa26.7■■□□□ 1.86
LITAF-205ENST00000570904 MYD88Q99836 296 aa26.7■■□□□ 1.86
LITAF-205ENST00000570904 ADAMTSL1Q8N6G6 1762 aa26.7■■□□□ 1.86
LITAF-205ENST00000570904 LTBP1Q14766 1721 aa26.7■■□□□ 1.86
LITAF-205ENST00000570904 PASKQ96RG2 1323 aa26.69■■□□□ 1.86
LITAF-205ENST00000570904 IRS4O14654 1257 aaPredicted RBP26.69■■□□□ 1.86
LITAF-205ENST00000570904 CCDC30Q5VVM6 783 aa26.69■■□□□ 1.86
LITAF-205ENST00000570904 PNMA8AQ86V59 439 aaPredicted RBP26.69■■□□□ 1.86
LITAF-205ENST00000570904 CREBZFQ9NS37 354 aa26.69■■□□□ 1.86
LITAF-205ENST00000570904 ANP32CO43423 234 aa26.68■■□□□ 1.86
LITAF-205ENST00000570904 LMOD1P29536 600 aaPredicted RBP26.68■■□□□ 1.86
LITAF-205ENST00000570904 SCNN1DP51172 638 aa26.68■■□□□ 1.86
LITAF-205ENST00000570904 SF3B3Q15393 1217 aaKnown RBP26.68■■□□□ 1.86
LITAF-205ENST00000570904 CCDC27Q2M243 656 aa26.68■■□□□ 1.86
LITAF-205ENST00000570904 WWC1Q8IX03 1113 aa26.68■■□□□ 1.86
LITAF-205ENST00000570904 CELF1Q92879 486 aaKnown RBP26.68■■□□□ 1.86
LITAF-205ENST00000570904 VPS33BQ9H267 617 aa26.68■■□□□ 1.86
LITAF-205ENST00000570904 COL4A1P02462 1669 aa26.67■■□□□ 1.86
LITAF-205ENST00000570904 ITGBL1O95965 494 aaPredicted RBP26.66■■□□□ 1.86
LITAF-205ENST00000570904 EPS15P42566 896 aa26.66■■□□□ 1.86
LITAF-205ENST00000570904 MAP1SQ66K74 1059 aaPredicted RBP26.66■■□□□ 1.86
LITAF-205ENST00000570904 TMC4Q7Z404 712 aa26.66■■□□□ 1.86
LITAF-205ENST00000570904 DUOX1Q9NRD9 1551 aa26.66■■□□□ 1.86
LITAF-205ENST00000570904 LRRC37AA6NMS7 1700 aa26.65■■□□□ 1.86
LITAF-205ENST00000570904 KIAA2012Q0VF49 1180 aa26.65■■□□□ 1.86
LITAF-205ENST00000570904 IFFO2Q5TF58 517 aa26.65■■□□□ 1.86
LITAF-205ENST00000570904 ZBTB38Q8NAP3 1195 aaPredicted RBP26.65■■□□□ 1.86
LITAF-205ENST00000570904 MKRN1Q9UHC7 482 aaKnown RBP26.65■■□□□ 1.86
LITAF-205ENST00000570904 ZNRF3Q9ULT6 936 aa26.65■■□□□ 1.86
LITAF-205ENST00000570904 CXCL9Q07325 125 aa26.64■■□□□ 1.86
LITAF-205ENST00000570904 DDX58O95786 925 aaKnown RBP26.63■■□□□ 1.85
LITAF-205ENST00000570904 CNTROBQ8N137 903 aa26.63■■□□□ 1.85
LITAF-205ENST00000570904 JARID2Q92833 1246 aaPredicted RBP26.63■■□□□ 1.85
LITAF-205ENST00000570904 METTL22Q9BUU2 404 aaPredicted RBP26.63■■□□□ 1.85
LITAF-205ENST00000570904 CHMP4AQ9BY43 222 aa26.63■■□□□ 1.85
LITAF-205ENST00000570904 CCDC191Q8NCU4 936 aa26.62■■□□□ 1.85
LITAF-205ENST00000570904 CWC25Q9NXE8 425 aaPredicted RBP26.62■■□□□ 1.85
LITAF-205ENST00000570904 PCCAP05165 728 aaPredicted RBP26.61■■□□□ 1.85
LITAF-205ENST00000570904 MAP3K2Q9Y2U5 619 aa26.61■■□□□ 1.85
LITAF-205ENST00000570904 RAD17O75943 681 aa26.6■■□□□ 1.85
LITAF-205ENST00000570904 TWISTNBQ3B726 338 aaPredicted RBP26.6■■□□□ 1.85
LITAF-205ENST00000570904 CIAPIN1Q6FI81 312 aa26.6■■□□□ 1.85
LITAF-205ENST00000570904 STK31Q9BXU1 1019 aa26.6■■□□□ 1.85
LITAF-205ENST00000570904 SEC31BQ9NQW1 1179 aa26.6■■□□□ 1.85
LITAF-205ENST00000570904 NSFL1CQ9UNZ2 370 aaKnown RBP26.6■■□□□ 1.85
LITAF-205ENST00000570904 SALL2Q9Y467 1007 aaPredicted RBP26.6■■□□□ 1.85
LITAF-205ENST00000570904 IL16Q14005 1332 aa26.6■■□□□ 1.85
LITAF-205ENST00000570904 TMEM88BA6NKF7 163 aa26.59■■□□□ 1.85
LITAF-205ENST00000570904 GMPSP49915 693 aaPredicted RBP26.59■■□□□ 1.85
LITAF-205ENST00000570904 GPSM2P81274 684 aa26.59■■□□□ 1.85
LITAF-205ENST00000570904 GPRC5DQ9NZD1 345 aa26.59■■□□□ 1.85
LITAF-205ENST00000570904 CNTNAP1P78357 1384 aa26.58■■□□□ 1.85
LITAF-205ENST00000570904 PI4KAP2A4QPH2 592 aa26.58■■□□□ 1.85
LITAF-205ENST00000570904 YDJCA8MPS7 323 aa26.58■■□□□ 1.85
LITAF-205ENST00000570904 HSPA1AP0DMV8 641 aaKnown RBP26.58■■□□□ 1.85
LITAF-205ENST00000570904 HSPA1BP0DMV9 641 aaKnown RBP26.58■■□□□ 1.85
LITAF-205ENST00000570904 RPS8P62241 208 aaKnown RBP26.58■■□□□ 1.85
LITAF-205ENST00000570904 KSR2Q6VAB6 950 aa26.58■■□□□ 1.85
LITAF-205ENST00000570904 PI4KAP1Q8N8J0 262 aa26.58■■□□□ 1.85
LITAF-205ENST00000570904 HSP90B1P14625 803 aaKnown RBP26.57■■□□□ 1.84
LITAF-205ENST00000570904 USP50Q70EL3 339 aaPredicted RBP26.57■■□□□ 1.84
LITAF-205ENST00000570904 G2E3Q7L622 706 aa26.57■■□□□ 1.84
LITAF-205ENST00000570904 CCDC85AQ96PX6 553 aaPredicted RBP26.57■■□□□ 1.84
LITAF-205ENST00000570904 POLLQ9UGP5 575 aa26.57■■□□□ 1.84
LITAF-205ENST00000570904 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
LITAF-205ENST00000570904 C6orf229H3BNL8 230 aa26.56■■□□□ 1.84
LITAF-205ENST00000570904 RIMBP2O15034 1052 aa26.56■■□□□ 1.84
LITAF-205ENST00000570904 PDE8AO60658 829 aa26.56■■□□□ 1.84
LITAF-205ENST00000570904 IGKV5-2P06315 115 aa26.56■■□□□ 1.84
LITAF-205ENST00000570904 WASHC4Q2M389 1173 aa26.56■■□□□ 1.84
LITAF-205ENST00000570904 NCBP3Q53F19 620 aaKnown RBP26.56■■□□□ 1.84
LITAF-205ENST00000570904 ADARB2Q9NS39 739 aaKnown RBP26.56■■□□□ 1.84
LITAF-205ENST00000570904 CCDC152Q4G0S7 254 aa26.55■■□□□ 1.84
LITAF-205ENST00000570904 GPR101Q96P66 508 aaPredicted RBP26.55■■□□□ 1.84
LITAF-205ENST00000570904 SLC4A2P04920 1241 aa26.54■■□□□ 1.84
LITAF-205ENST00000570904 FMR1Q06787 632 aaKnown RBP eCLIP26.54■■□□□ 1.84
LITAF-205ENST00000570904 TNIP1Q15025 636 aa26.54■■□□□ 1.84
LITAF-205ENST00000570904 BCL2L13Q9BXK5 485 aa26.54■■□□□ 1.84
LITAF-205ENST00000570904 DBNDD1Q9H9R9 158 aa26.54■■□□□ 1.84
LITAF-205ENST00000570904 CDHR2Q9BYE9 1310 aa26.53■■□□□ 1.84
LITAF-205ENST00000570904 NEXNQ0ZGT2 675 aa26.52■■□□□ 1.84
LITAF-205ENST00000570904 CWF19L2Q2TBE0 894 aaKnown RBP26.52■■□□□ 1.84
LITAF-205ENST00000570904 COL13A1Q5TAT6 717 aaPredicted RBP26.52■■□□□ 1.84
LITAF-205ENST00000570904 TBC1D16Q8TBP0 767 aa26.52■■□□□ 1.84
LITAF-205ENST00000570904 SHTN1A0MZ66 631 aa26.51■■□□□ 1.83
LITAF-205ENST00000570904 WDR63Q8IWG1 891 aa26.51■■□□□ 1.83
LITAF-205ENST00000570904 EYA3Q99504 573 aa26.51■■□□□ 1.83
LITAF-205ENST00000570904 NEURL1BA8MQ27 555 aa26.5■■□□□ 1.83
LITAF-205ENST00000570904 TRAF5O00463 557 aa26.5■■□□□ 1.83
LITAF-205ENST00000570904 PSMD14O00487 310 aa26.5■■□□□ 1.83
LITAF-205ENST00000570904 VEGFBP49765 207 aa26.5■■□□□ 1.83
LITAF-205ENST00000570904 DOK7Q18PE1 504 aa26.5■■□□□ 1.83
LITAF-205ENST00000570904 ECE2O60344 883 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 UFL1O94874 794 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 CTSWP56202 376 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 FLIIQ13045 1269 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 FAM9BQ8IZU0 186 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 TRPM4Q8TD43 1214 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 PODXL2Q9NZ53 605 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms