RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
ABR-208ENST00000570688 TMEM57Q8N5G2 664 aa14.15□□□□□ -0.14
ABR-208ENST00000570688 TTLL11Q8NHH1 800 aa14.15□□□□□ -0.14
ABR-208ENST00000570688 CELF1Q92879 486 aaKnown RBP14.15□□□□□ -0.14
ABR-208ENST00000570688 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
ABR-208ENST00000570688 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
ABR-208ENST00000570688 API5Q9BZZ5 524 aaKnown RBP14.15□□□□□ -0.14
ABR-208ENST00000570688 PDE8AO60658 829 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
ABR-208ENST00000570688 TTLL6Q8N841 843 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 ANKRD44Q8N8A2 993 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 MEIS3Q99687 375 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
ABR-208ENST00000570688 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
ABR-208ENST00000570688 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 CCDC88AQ3V6T2 1871 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 NFKBIEO00221 500 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 CSF1RP07333 972 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 CTSWP56202 376 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
ABR-208ENST00000570688 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 CRAMP1Q96RY5 1269 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 GREM2Q9H772 168 aa14.13□□□□□ -0.15
ABR-208ENST00000570688 COL4A5P29400 1685 aa14.12□□□□□ -0.15
ABR-208ENST00000570688 C21orf2O43822 256 aa14.12□□□□□ -0.15
ABR-208ENST00000570688 GPR162Q16538 588 aa14.12□□□□□ -0.15
ABR-208ENST00000570688 PDZRN3Q9UPQ7 1066 aa14.12□□□□□ -0.15
ABR-208ENST00000570688 A0A1B0GUL6 1792 aa14.11□□□□□ -0.15
ABR-208ENST00000570688 RASSF7Q02833 373 aa14.11□□□□□ -0.15
ABR-208ENST00000570688 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
ABR-208ENST00000570688 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
ABR-208ENST00000570688 CHD4Q14839 1912 aa14.11□□□□□ -0.15
ABR-208ENST00000570688 RTL9Q8NET4 1388 aa14.1□□□□□ -0.15
ABR-208ENST00000570688 WTIPA6NIX2 430 aaPredicted RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 CCT4P50991 539 aaKnown RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 GRAPQ13588 217 aa14.1□□□□□ -0.15
ABR-208ENST00000570688 RABL6Q3YEC7 729 aaPredicted RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 GRAPLQ8TC17 118 aaPredicted RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
ABR-208ENST00000570688 IPO8O15397 1037 aaKnown RBP14.09□□□□□ -0.15
ABR-208ENST00000570688 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
ABR-208ENST00000570688 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
ABR-208ENST00000570688 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
ABR-208ENST00000570688 C9orf78Q9NZ63 289 aaPredicted RBP14.09□□□□□ -0.15
ABR-208ENST00000570688 PPEF1O14829 653 aaPredicted RBP14.08□□□□□ -0.16
ABR-208ENST00000570688 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 ITGA6P23229 1130 aa14.07□□□□□ -0.16
ABR-208ENST00000570688 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
ABR-208ENST00000570688 RFX5P48382 616 aaPredicted RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 DDX46Q7L014 1031 aaKnown RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 ATP6V0A2Q9Y487 856 aa14.07□□□□□ -0.16
ABR-208ENST00000570688 LRRFIP2Q9Y608 721 aaKnown RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
ABR-208ENST00000570688 RPS8P62241 208 aaKnown RBP14.06□□□□□ -0.16
ABR-208ENST00000570688 CCDC152Q4G0S7 254 aa14.06□□□□□ -0.16
ABR-208ENST00000570688 ARHGAP27Q6ZUM4 889 aa14.06□□□□□ -0.16
ABR-208ENST00000570688 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
ABR-208ENST00000570688 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
ABR-208ENST00000570688 RRP1P56182 461 aaKnown RBP14.05□□□□□ -0.16
ABR-208ENST00000570688 SP8Q8IXZ3 490 aa14.05□□□□□ -0.16
ABR-208ENST00000570688 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
ABR-208ENST00000570688 C1orf115Q9H7X2 142 aa14.05□□□□□ -0.16
ABR-208ENST00000570688 SNAP23O00161 211 aa14.04□□□□□ -0.16
ABR-208ENST00000570688 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
ABR-208ENST00000570688 BBOX1O75936 387 aa14.04□□□□□ -0.16
ABR-208ENST00000570688 GPSM2P81274 684 aa14.04□□□□□ -0.16
ABR-208ENST00000570688 GPR101Q96P66 508 aaPredicted RBP14.04□□□□□ -0.16
ABR-208ENST00000570688 LTBP3Q9NS15 1303 aa14.04□□□□□ -0.16
ABR-208ENST00000570688 UBTFL1P0CB47 393 aaPredicted RBP14.03□□□□□ -0.16
ABR-208ENST00000570688 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
ABR-208ENST00000570688 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
ABR-208ENST00000570688 ITPRIPQ8IWB1 547 aa14.03□□□□□ -0.16
ABR-208ENST00000570688 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
ABR-208ENST00000570688 TIAM2Q8IVF5 1701 aa14.03□□□□□ -0.16
ABR-208ENST00000570688 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.17
ABR-208ENST00000570688 PNMA6EA0A0J9YXQ4 647 aa14.02□□□□□ -0.17
ABR-208ENST00000570688 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.17
ABR-208ENST00000570688 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
ABR-208ENST00000570688 MINPP1Q9UNW1 487 aa14.02□□□□□ -0.17
ABR-208ENST00000570688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.02□□□□□ -0.17
ABR-208ENST00000570688 SCN9AQ15858 1988 aa14.02□□□□□ -0.17
ABR-208ENST00000570688 ZNF646O15015 1829 aaPredicted RBP14.01□□□□□ -0.17
ABR-208ENST00000570688 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
ABR-208ENST00000570688 PTPN12Q05209 780 aaKnown RBP14.01□□□□□ -0.17
ABR-208ENST00000570688 MTX1Q13505 466 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 ANKRD18AQ8IVF6 992 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 FTSJ3Q8IY81 847 aaKnown RBP14.01□□□□□ -0.17
ABR-208ENST00000570688 PSMD1Q99460 953 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
ABR-208ENST00000570688 PA2G4Q9UQ80 394 aaKnown RBP14.01□□□□□ -0.17
ABR-208ENST00000570688 CHMP3Q9Y3E7 222 aa14.01□□□□□ -0.17
ABR-208ENST00000570688 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
ABR-208ENST00000570688 GNAI3P08754 354 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms