RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 IRS4O14654 1257 aaPredicted RBP27.16■■□□□ 1.94
RPA1-202ENST00000570451 CCDC30Q5VVM6 783 aa27.16■■□□□ 1.94
RPA1-202ENST00000570451 TSR2Q969E8 191 aaKnown RBP27.16■■□□□ 1.94
RPA1-202ENST00000570451 MYD88Q99836 296 aa27.16■■□□□ 1.94
RPA1-202ENST00000570451 RTFDC1Q9BY42 306 aaPredicted RBP27.16■■□□□ 1.94
RPA1-202ENST00000570451 VPS33BQ9H267 617 aa27.16■■□□□ 1.94
RPA1-202ENST00000570451 MKRN1Q9UHC7 482 aaKnown RBP27.16■■□□□ 1.94
RPA1-202ENST00000570451 PASKQ96RG2 1323 aa27.16■■□□□ 1.94
RPA1-202ENST00000570451 TRIM28Q13263 835 aaKnown RBP27.15■■□□□ 1.94
RPA1-202ENST00000570451 MRS2Q9HD23 443 aa27.15■■□□□ 1.94
RPA1-202ENST00000570451 ANP32CO43423 234 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 SCNN1DP51172 638 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 MAP1SQ66K74 1059 aaPredicted RBP27.14■■□□□ 1.94
RPA1-202ENST00000570451 TMC4Q7Z404 712 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 TSPYL6Q8N831 410 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 CHMP4AQ9BY43 222 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 ZNRF3Q9ULT6 936 aa27.14■■□□□ 1.94
RPA1-202ENST00000570451 ZNF316A6NFI3 1004 aaPredicted RBP27.13■■□□□ 1.93
RPA1-202ENST00000570451 EPS15P42566 896 aa27.13■■□□□ 1.93
RPA1-202ENST00000570451 SF3B3Q15393 1217 aaKnown RBP27.13■■□□□ 1.93
RPA1-202ENST00000570451 CELF1Q92879 486 aaKnown RBP27.13■■□□□ 1.93
RPA1-202ENST00000570451 ADAMTSL1Q8N6G6 1762 aa27.12■■□□□ 1.93
RPA1-202ENST00000570451 DDX58O95786 925 aaKnown RBP27.12■■□□□ 1.93
RPA1-202ENST00000570451 ITGBL1O95965 494 aaPredicted RBP27.12■■□□□ 1.93
RPA1-202ENST00000570451 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
RPA1-202ENST00000570451 LTBP1Q14766 1721 aa27.11■■□□□ 1.93
RPA1-202ENST00000570451 KIAA2012Q0VF49 1180 aa27.11■■□□□ 1.93
RPA1-202ENST00000570451 WWC1Q8IX03 1113 aa27.11■■□□□ 1.93
RPA1-202ENST00000570451 ZBTB38Q8NAP3 1195 aaPredicted RBP27.11■■□□□ 1.93
RPA1-202ENST00000570451 TMEM88BA6NKF7 163 aa27.1■■□□□ 1.93
RPA1-202ENST00000570451 CXCL9Q07325 125 aa27.1■■□□□ 1.93
RPA1-202ENST00000570451 CCDC27Q2M243 656 aa27.1■■□□□ 1.93
RPA1-202ENST00000570451 STK31Q9BXU1 1019 aa27.09■■□□□ 1.93
RPA1-202ENST00000570451 RAD17O75943 681 aa27.08■■□□□ 1.93
RPA1-202ENST00000570451 HSP90B1P14625 803 aaKnown RBP27.08■■□□□ 1.93
RPA1-202ENST00000570451 CCDC191Q8NCU4 936 aa27.08■■□□□ 1.93
RPA1-202ENST00000570451 JARID2Q92833 1246 aaPredicted RBP27.08■■□□□ 1.93
RPA1-202ENST00000570451 METTL22Q9BUU2 404 aaPredicted RBP27.08■■□□□ 1.93
RPA1-202ENST00000570451 CWC25Q9NXE8 425 aaPredicted RBP27.08■■□□□ 1.93
RPA1-202ENST00000570451 NSFL1CQ9UNZ2 370 aaKnown RBP27.08■■□□□ 1.93
RPA1-202ENST00000570451 LRRC37AA6NMS7 1700 aa27.07■■□□□ 1.92
RPA1-202ENST00000570451 DUOX1Q9NRD9 1551 aa27.07■■□□□ 1.92
RPA1-202ENST00000570451 HSPA1AP0DMV8 641 aaKnown RBP27.07■■□□□ 1.92
RPA1-202ENST00000570451 HSPA1BP0DMV9 641 aaKnown RBP27.07■■□□□ 1.92
RPA1-202ENST00000570451 GMPSP49915 693 aaPredicted RBP27.07■■□□□ 1.92
RPA1-202ENST00000570451 CIAPIN1Q6FI81 312 aa27.07■■□□□ 1.92
RPA1-202ENST00000570451 GPRC5DQ9NZD1 345 aa27.07■■□□□ 1.92
RPA1-202ENST00000570451 MAP3K2Q9Y2U5 619 aa27.07■■□□□ 1.92
RPA1-202ENST00000570451 SALL2Q9Y467 1007 aaPredicted RBP27.07■■□□□ 1.92
RPA1-202ENST00000570451 C6orf229H3BNL8 230 aa27.06■■□□□ 1.92
RPA1-202ENST00000570451 PCCAP05165 728 aaPredicted RBP27.06■■□□□ 1.92
RPA1-202ENST00000570451 USP50Q70EL3 339 aaPredicted RBP27.06■■□□□ 1.92
RPA1-202ENST00000570451 BCL2L13Q9BXK5 485 aa27.06■■□□□ 1.92
RPA1-202ENST00000570451 CNTNAP1P78357 1384 aa27.06■■□□□ 1.92
RPA1-202ENST00000570451 COL4A1P02462 1669 aa27.05■■□□□ 1.92
RPA1-202ENST00000570451 RPS8P62241 208 aaKnown RBP27.05■■□□□ 1.92
RPA1-202ENST00000570451 GPSM2P81274 684 aa27.05■■□□□ 1.92
RPA1-202ENST00000570451 TNIP1Q15025 636 aa27.05■■□□□ 1.92
RPA1-202ENST00000570451 WASHC4Q2M389 1173 aa27.05■■□□□ 1.92
RPA1-202ENST00000570451 TWISTNBQ3B726 338 aaPredicted RBP27.05■■□□□ 1.92
RPA1-202ENST00000570451 SEC31BQ9NQW1 1179 aa27.05■■□□□ 1.92
RPA1-202ENST00000570451 ADARB2Q9NS39 739 aaKnown RBP27.05■■□□□ 1.92
RPA1-202ENST00000570451 RIMBP2O15034 1052 aa27.04■■□□□ 1.92
RPA1-202ENST00000570451 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
RPA1-202ENST00000570451 PI4KAP2A4QPH2 592 aa27.03■■□□□ 1.92
RPA1-202ENST00000570451 IL16Q14005 1332 aa27.03■■□□□ 1.92
RPA1-202ENST00000570451 CCDC152Q4G0S7 254 aa27.03■■□□□ 1.92
RPA1-202ENST00000570451 COL13A1Q5TAT6 717 aaPredicted RBP27.03■■□□□ 1.92
RPA1-202ENST00000570451 KSR2Q6VAB6 950 aa27.03■■□□□ 1.92
RPA1-202ENST00000570451 PI4KAP1Q8N8J0 262 aa27.03■■□□□ 1.92
RPA1-202ENST00000570451 YDJCA8MPS7 323 aa27.02■■□□□ 1.92
RPA1-202ENST00000570451 PDE8AO60658 829 aa27.02■■□□□ 1.92
RPA1-202ENST00000570451 DBNDD1Q9H9R9 158 aa27.02■■□□□ 1.92
RPA1-202ENST00000570451 POLLQ9UGP5 575 aa27.02■■□□□ 1.92
RPA1-202ENST00000570451 NEXNQ0ZGT2 675 aa27.01■■□□□ 1.91
RPA1-202ENST00000570451 GPR101Q96P66 508 aaPredicted RBP27.01■■□□□ 1.91
RPA1-202ENST00000570451 ABT1Q9ULW3 272 aaKnown RBP27.01■■□□□ 1.91
RPA1-202ENST00000570451 SLC4A2P04920 1241 aa27■■□□□ 1.91
RPA1-202ENST00000570451 EYA3Q99504 573 aa27■■□□□ 1.91
RPA1-202ENST00000570451 IGKV5-2P06315 115 aa26.99■■□□□ 1.91
RPA1-202ENST00000570451 VEGFBP49765 207 aa26.99■■□□□ 1.91
RPA1-202ENST00000570451 FMR1Q06787 632 aaKnown RBP eCLIP26.99■■□□□ 1.913e-6■■□□□ 12.4
RPA1-202ENST00000570451 G2E3Q7L622 706 aa26.99■■□□□ 1.91
RPA1-202ENST00000570451 TBC1D16Q8TBP0 767 aa26.99■■□□□ 1.91
RPA1-202ENST00000570451 ANKIB1Q9P2G1 1089 aa26.99■■□□□ 1.91
RPA1-202ENST00000570451 CDHR2Q9BYE9 1310 aa26.98■■□□□ 1.91
RPA1-202ENST00000570451 FANCIQ9NVI1 1328 aa26.98■■□□□ 1.91
RPA1-202ENST00000570451 TRAF5O00463 557 aa26.98■■□□□ 1.91
RPA1-202ENST00000570451 DOK7Q18PE1 504 aa26.98■■□□□ 1.91
RPA1-202ENST00000570451 NCBP3Q53F19 620 aaKnown RBP26.97■■□□□ 1.91
RPA1-202ENST00000570451 CNOT7Q9UIV1 285 aaKnown RBP26.97■■□□□ 1.91
RPA1-202ENST00000570451 ZBTB12Q9Y330 459 aaPredicted RBP26.97■■□□□ 1.91
RPA1-202ENST00000570451 PSMD14O00487 310 aa26.96■■□□□ 1.91
RPA1-202ENST00000570451 ECE2O60344 883 aa26.96■■□□□ 1.91
RPA1-202ENST00000570451 UFL1O94874 794 aa26.96■■□□□ 1.91
RPA1-202ENST00000570451 CWF19L2Q2TBE0 894 aaKnown RBP26.96■■□□□ 1.91
RPA1-202ENST00000570451 DEFB115Q30KQ5 88 aa26.96■■□□□ 1.91
RPA1-202ENST00000570451 SHTN1A0MZ66 631 aa26.95■■□□□ 1.9
RPA1-202ENST00000570451 G3V3G9 751 aa26.95■■□□□ 1.9
RPA1-202ENST00000570451 CTSWP56202 376 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms