RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GBA2Q9HCG7 927 aaPredicted RBP13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 ZNF157P51786 506 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 SAMD7Q7Z3H4 446 aa13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 MICALL2Q8IY33 904 aa13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 C2orf69Q8N8R5 385 aa13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 CSRNP1Q96S65 589 aa13.98□□□□□ -0.17
CTDNEP1-202ENST00000570380 ABCC4O15439 1325 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 MPNDQ8N594 471 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 DLG5Q8TDM6 1919 aa13.97□□□□□ -0.17
CTDNEP1-202ENST00000570380 ADM5C9JUS6 153 aa13.96□□□□□ -0.17
CTDNEP1-202ENST00000570380 EGFRP00533 1210 aa13.96□□□□□ -0.17
CTDNEP1-202ENST00000570380 SLC10A3P09131 477 aa13.96□□□□□ -0.17
CTDNEP1-202ENST00000570380 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
CTDNEP1-202ENST00000570380 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
CTDNEP1-202ENST00000570380 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.18
CTDNEP1-202ENST00000570380 TBC1D10BQ4KMP7 808 aaPredicted RBP13.95□□□□□ -0.18
CTDNEP1-202ENST00000570380 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
CTDNEP1-202ENST00000570380 DPF2Q92785 391 aa13.95□□□□□ -0.18
CTDNEP1-202ENST00000570380 MKI67P46013 3256 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 LRRC37AA6NMS7 1700 aa13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 BBOX1O75936 387 aa13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 MYL6BP14649 208 aa13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
CTDNEP1-202ENST00000570380 PSMD14O00487 310 aa13.93□□□□□ -0.18
CTDNEP1-202ENST00000570380 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-202ENST00000570380 PKN2Q16513 984 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-202ENST00000570380 DCPSQ96C86 337 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-202ENST00000570380 SCN9AQ15858 1988 aa13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 PARP10Q53GL7 1025 aa13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 RBM26Q5T8P6 1007 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 DDX60Q8IY21 1712 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-202ENST00000570380 RASAL3Q86YV0 1011 aa13.91□□□□□ -0.18
CTDNEP1-202ENST00000570380 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-202ENST00000570380 ZNF296Q8WUU4 475 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-202ENST00000570380 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-202ENST00000570380 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
CTDNEP1-202ENST00000570380 DBNDD1Q9H9R9 158 aa13.9□□□□□ -0.18
CTDNEP1-202ENST00000570380 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
CTDNEP1-202ENST00000570380 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.19
CTDNEP1-202ENST00000570380 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 HCLS1P14317 486 aaPredicted RBP13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 GRAPQ13588 217 aa13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 CDCA5Q96FF9 252 aa13.89□□□□□ -0.19
CTDNEP1-202ENST00000570380 PAPPA2Q9BXP8 1791 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 RTL9Q8NET4 1388 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 RPS12P25398 132 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 WASHC4Q2M389 1173 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 KIF4BQ2VIQ3 1234 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 FBXO46Q6PJ61 603 aaPredicted RBP13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 SULF1Q8IWU6 871 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 GGA3Q9NZ52 723 aa13.88□□□□□ -0.19
CTDNEP1-202ENST00000570380 PSME4Q14997 1843 aa13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 CENPFP49454 3210 aa13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 THUMPD2Q9BTF0 503 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
CTDNEP1-202ENST00000570380 RBBP6Q7Z6E9 1792 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 COL4A1P02462 1669 aa13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 GPR25O00155 361 aa13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 NSFL1CQ9UNZ2 370 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
CTDNEP1-202ENST00000570380 HTTP42858 3142 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 ECE2O60344 883 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 PDIA6Q15084 440 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 NLRP10Q86W26 655 aa13.85□□□□□ -0.19
CTDNEP1-202ENST00000570380 BRCA2P51587 3418 aa13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 TM4SF4P48230 202 aa13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 FKBP1BP68106 108 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms