RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
HERPUD1-215ENST00000568676 GRAPQ13588 217 aa20.63■□□□□ 0.89
HERPUD1-215ENST00000568676 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
HERPUD1-215ENST00000568676 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
HERPUD1-215ENST00000568676 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
HERPUD1-215ENST00000568676 TRAF5O00463 557 aa20.62■□□□□ 0.89
HERPUD1-215ENST00000568676 GMPSP49915 693 aaPredicted RBP20.62■□□□□ 0.89
HERPUD1-215ENST00000568676 SAPCD2Q86UD0 394 aa20.62■□□□□ 0.89
HERPUD1-215ENST00000568676 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
HERPUD1-215ENST00000568676 TRMT112Q9UI30 125 aaKnown RBP20.62■□□□□ 0.89
HERPUD1-215ENST00000568676 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.89
HERPUD1-215ENST00000568676 RALBP1Q15311 655 aa20.61■□□□□ 0.89
HERPUD1-215ENST00000568676 PROSER3Q2NL68 480 aa20.61■□□□□ 0.89
HERPUD1-215ENST00000568676 CELF2O95319 508 aaKnown RBP20.6■□□□□ 0.89
HERPUD1-215ENST00000568676 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
HERPUD1-215ENST00000568676 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
HERPUD1-215ENST00000568676 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
HERPUD1-215ENST00000568676 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
HERPUD1-215ENST00000568676 ANXA1P04083 346 aa20.59■□□□□ 0.89
HERPUD1-215ENST00000568676 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
HERPUD1-215ENST00000568676 AIMP1Q12904 312 aaKnown RBP20.59■□□□□ 0.89
HERPUD1-215ENST00000568676 GRM1Q13255 1194 aa20.59■□□□□ 0.89
HERPUD1-215ENST00000568676 LAMB2P55268 1798 aa20.59■□□□□ 0.89
HERPUD1-215ENST00000568676 H7C1D1 291 aa20.58■□□□□ 0.89
HERPUD1-215ENST00000568676 HOXB7P09629 217 aa20.58■□□□□ 0.89
HERPUD1-215ENST00000568676 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.89
HERPUD1-215ENST00000568676 DPF2Q92785 391 aa20.58■□□□□ 0.89
HERPUD1-215ENST00000568676 RAD17O75943 681 aa20.57■□□□□ 0.88
HERPUD1-215ENST00000568676 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
HERPUD1-215ENST00000568676 CNOT7Q9UIV1 285 aaKnown RBP20.57■□□□□ 0.88
HERPUD1-215ENST00000568676 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
HERPUD1-215ENST00000568676 CHL1O00533 1208 aa20.56■□□□□ 0.88
HERPUD1-215ENST00000568676 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
HERPUD1-215ENST00000568676 SF3B3Q15393 1217 aaKnown RBP20.55■□□□□ 0.88
HERPUD1-215ENST00000568676 AOC2O75106 756 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 RPS12P25398 132 aaKnown RBP20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 NOGQ13253 232 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 WASHC4Q2M389 1173 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 ANKRD13DQ6ZTN6 518 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 DBF4Q9UBU7 674 aaPredicted RBP20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 DUOX1Q9NRD9 1551 aa20.54■□□□□ 0.88
HERPUD1-215ENST00000568676 YDJCA8MPS7 323 aa20.53■□□□□ 0.88
HERPUD1-215ENST00000568676 MICALL2Q8IY33 904 aa20.53■□□□□ 0.88
HERPUD1-215ENST00000568676 TRPM4Q8TD43 1214 aa20.53■□□□□ 0.88
HERPUD1-215ENST00000568676 EYA3Q99504 573 aa20.53■□□□□ 0.88
HERPUD1-215ENST00000568676 CHPF2Q9P2E5 772 aa20.53■□□□□ 0.88
HERPUD1-215ENST00000568676 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 RGS19P49795 217 aa20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 ZNF408Q9H9D4 720 aa20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
HERPUD1-215ENST00000568676 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
HERPUD1-215ENST00000568676 HYPKQ9NX55 129 aa20.51■□□□□ 0.87
HERPUD1-215ENST00000568676 CCDC85CA6NKD9 419 aa20.5■□□□□ 0.87
HERPUD1-215ENST00000568676 FAM161AQ3B820 660 aa20.5■□□□□ 0.87
HERPUD1-215ENST00000568676 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
HERPUD1-215ENST00000568676 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
HERPUD1-215ENST00000568676 PSMD14O00487 310 aa20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 MLLT1Q03111 559 aaPredicted RBP20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
HERPUD1-215ENST00000568676 C6orf229H3BNL8 230 aa20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 HUNKP57058 714 aa20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 DCPSQ96C86 337 aaKnown RBP20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 ZBTB12Q9Y330 459 aaPredicted RBP20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
HERPUD1-215ENST00000568676 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 KRT24Q2M2I5 525 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 KRT26Q7Z3Y9 468 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 C2orf69Q8N8R5 385 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 DBNDD1Q9H9R9 158 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 POLLQ9UGP5 575 aa20.47■□□□□ 0.87
HERPUD1-215ENST00000568676 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 ECE2O60344 883 aa20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 SAMD7Q7Z3H4 446 aa20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 ZC3H12CQ9C0D7 883 aaKnown RBP20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 GBA2Q9HCG7 927 aaPredicted RBP20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 SAGE1Q9NXZ1 904 aa20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 PODXL2Q9NZ53 605 aa20.46■□□□□ 0.87
HERPUD1-215ENST00000568676 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 GPSM2P81274 684 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 RGMBQ6NW40 437 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 TAF1P21675 1872 aa20.45■□□□□ 0.86
HERPUD1-215ENST00000568676 TBC1D10BQ4KMP7 808 aaPredicted RBP20.44■□□□□ 0.86
HERPUD1-215ENST00000568676 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
HERPUD1-215ENST00000568676 ZBTB38Q8NAP3 1195 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms