RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 EXOC5O00471 708 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 SLC27A2O14975 620 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
CDH1-210ENST00000566612 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 C8orf76Q96K31 380 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 AOX1Q06278 1338 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 IL15P40933 162 aaPredicted RBP13.61□□□□□ -0.23
CDH1-210ENST00000566612 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
CDH1-210ENST00000566612 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 BRD1O95696 1058 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 HELBQ8NG08 1087 aaPredicted RBP13.6□□□□□ -0.23
CDH1-210ENST00000566612 RAI14Q9P0K7 980 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 G3V3G9 751 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 IL2RBP14784 551 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
CDH1-210ENST00000566612 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
CDH1-210ENST00000566612 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
CDH1-210ENST00000566612 MINDY4BA8MYZ0 360 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 RAD21O60216 631 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 CCAR2Q8N163 923 aaKnown RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 PHKG2P15735 406 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
CDH1-210ENST00000566612 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 SEC62Q99442 399 aaKnown RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
CDH1-210ENST00000566612 GPT2Q8TD30 523 aa13.58□□□□□ -0.23
CDH1-210ENST00000566612 NAPBQ9H115 298 aa13.58□□□□□ -0.23
CDH1-210ENST00000566612 TPM3P06753 285 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 IGHMBP2P38935 993 aaKnown RBP13.58□□□□□ -0.24
CDH1-210ENST00000566612 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 PDILTQ8N807 584 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
CDH1-210ENST00000566612 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 ZNF165P49910 485 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 MICU3Q86XE3 530 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
CDH1-210ENST00000566612 BIN1O00499 593 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 OLFM4Q6UX06 510 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
CDH1-210ENST00000566612 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
CDH1-210ENST00000566612 A0A1B0GUL7 405 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 ME3Q16798 604 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
CDH1-210ENST00000566612 ZNF445P59923 1031 aa13.57□□□□□ -0.24
CDH1-210ENST00000566612 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
CDH1-210ENST00000566612 JMYQ8N9B5 988 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 UBAC1Q9BSL1 405 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 LSG1Q9H089 658 aaKnown RBP13.56□□□□□ -0.24
CDH1-210ENST00000566612 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
CDH1-210ENST00000566612 MARCH6O60337 910 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 RPS6KB1P23443 525 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
CDH1-210ENST00000566612 KDRP35968 1356 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 PPLO60437 1756 aa13.56□□□□□ -0.24
CDH1-210ENST00000566612 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
CDH1-210ENST00000566612 XBP1P17861 261 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
CDH1-210ENST00000566612 MYOM1P52179 1685 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
CDH1-210ENST00000566612 SERPINC1P01008 464 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 CRB1P82279 1406 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 EYA2O00167 538 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 JAK2O60674 1132 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 CDKL5O76039 1030 aa13.55□□□□□ -0.24
CDH1-210ENST00000566612 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 PI4K2BQ8TCG2 481 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
CDH1-210ENST00000566612 RNF113AO15541 343 aaKnown RBP13.54□□□□□ -0.24
CDH1-210ENST00000566612 DHX32Q7L7V1 743 aaKnown RBP13.54□□□□□ -0.24
CDH1-210ENST00000566612 ERBB3P21860 1342 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 MCM5P33992 734 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 ZKSCAN5Q9Y2L8 839 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 RXRAP19793 462 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 POLA2Q14181 598 aa13.54□□□□□ -0.24
CDH1-210ENST00000566612 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms