RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 RTL9Q8NET4 1388 aa19.4■□□□□ 0.7
SNHG20-204ENST00000566583 BRCA1P38398 1863 aaKnown RBP19.39■□□□□ 0.7
SNHG20-204ENST00000566583 CTSWP56202 376 aa19.39■□□□□ 0.69
SNHG20-204ENST00000566583 POLA2Q14181 598 aa19.39■□□□□ 0.69
SNHG20-204ENST00000566583 LRP5O75197 1615 aa19.39■□□□□ 0.69
SNHG20-204ENST00000566583 A0A1B0GUL6 1792 aa19.39■□□□□ 0.69
SNHG20-204ENST00000566583 PNMA6EA0A0J9YXQ4 647 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
SNHG20-204ENST00000566583 ST5P78524 1137 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 LMBR1LQ6UX01 489 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 BRIP1Q9BX63 1249 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 CACNA1SQ13698 1873 aa19.38■□□□□ 0.69
SNHG20-204ENST00000566583 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
SNHG20-204ENST00000566583 RFX5P48382 616 aaPredicted RBP19.37■□□□□ 0.69
SNHG20-204ENST00000566583 CRY2Q49AN0 593 aa19.37■□□□□ 0.69
SNHG20-204ENST00000566583 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
SNHG20-204ENST00000566583 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
SNHG20-204ENST00000566583 POLD1P28340 1107 aa19.34■□□□□ 0.69
SNHG20-204ENST00000566583 FAM161AQ3B820 660 aa19.34■□□□□ 0.69
SNHG20-204ENST00000566583 GREM2Q9H772 168 aa19.34■□□□□ 0.69
SNHG20-204ENST00000566583 SRGAP3O43295 1099 aa19.33■□□□□ 0.69
SNHG20-204ENST00000566583 SPON1Q9HCB6 807 aa19.33■□□□□ 0.69
SNHG20-204ENST00000566583 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.69
SNHG20-204ENST00000566583 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.69
SNHG20-204ENST00000566583 NPHP1O15259 732 aa19.32■□□□□ 0.68
SNHG20-204ENST00000566583 IGHDP01880 384 aa19.32■□□□□ 0.68
SNHG20-204ENST00000566583 HOXA10P31260 410 aaPredicted RBP19.32■□□□□ 0.68
SNHG20-204ENST00000566583 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
SNHG20-204ENST00000566583 SLX4Q8IY92 1834 aa19.31■□□□□ 0.68
SNHG20-204ENST00000566583 ITGA6P23229 1130 aa19.31■□□□□ 0.68
SNHG20-204ENST00000566583 PTPN12Q05209 780 aaKnown RBP19.31■□□□□ 0.68
SNHG20-204ENST00000566583 COPRSQ9NQ92 184 aa19.31■□□□□ 0.68
SNHG20-204ENST00000566583 GTF3C3Q9Y5Q9 886 aa19.31■□□□□ 0.68
SNHG20-204ENST00000566583 SRGNP10124 158 aa19.3■□□□□ 0.68
SNHG20-204ENST00000566583 PDE6BP35913 854 aa19.3■□□□□ 0.68
SNHG20-204ENST00000566583 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
SNHG20-204ENST00000566583 SEC31BQ9NQW1 1179 aa19.3■□□□□ 0.68
SNHG20-204ENST00000566583 NOP58Q9Y2X3 529 aaKnown RBP19.3■□□□□ 0.68
SNHG20-204ENST00000566583 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
SNHG20-204ENST00000566583 HMMRO75330 724 aa19.29■□□□□ 0.68
SNHG20-204ENST00000566583 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
SNHG20-204ENST00000566583 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
SNHG20-204ENST00000566583 ANKRD18BA2A2Z9 1011 aa19.28■□□□□ 0.68
SNHG20-204ENST00000566583 IFIT5Q13325 482 aaKnown RBP19.28■□□□□ 0.68
SNHG20-204ENST00000566583 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
SNHG20-204ENST00000566583 PA2G4Q9UQ80 394 aaKnown RBP19.28■□□□□ 0.68
SNHG20-204ENST00000566583 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
SNHG20-204ENST00000566583 KCNA3P22001 575 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 CCDC57Q2TAC2 916 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 SMC5Q8IY18 1101 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 ZNF594Q96JF6 807 aaPredicted RBP19.27■□□□□ 0.68
SNHG20-204ENST00000566583 CRAMP1Q96RY5 1269 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
SNHG20-204ENST00000566583 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 CD2APQ9Y5K6 639 aa19.27■□□□□ 0.68
SNHG20-204ENST00000566583 NPR1P16066 1061 aa19.26■□□□□ 0.67
SNHG20-204ENST00000566583 ATG9AQ7Z3C6 839 aa19.26■□□□□ 0.67
SNHG20-204ENST00000566583 CELF1Q92879 486 aaKnown RBP19.26■□□□□ 0.67
SNHG20-204ENST00000566583 FBXO3Q9UK99 471 aa19.26■□□□□ 0.67
SNHG20-204ENST00000566583 CHRNA5P30532 468 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 TGFB2P61812 414 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 GRAPQ13588 217 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 GRAPLQ8TC17 118 aaPredicted RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 PUS3Q9BZE2 481 aaKnown RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 CIAO1O76071 339 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 CCDC136Q96JN2 1154 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
SNHG20-204ENST00000566583 RIPOR2Q9Y4F9 1068 aa19.25■□□□□ 0.67
SNHG20-204ENST00000566583 H0YIN7 160 aa19.24■□□□□ 0.67
SNHG20-204ENST00000566583 EYA2O00167 538 aa19.24■□□□□ 0.67
SNHG20-204ENST00000566583 RPS8P62241 208 aaKnown RBP19.24■□□□□ 0.67
SNHG20-204ENST00000566583 LRRC24Q50LG9 513 aa19.24■□□□□ 0.67
SNHG20-204ENST00000566583 EXOC6BQ9Y2D4 811 aa19.24■□□□□ 0.67
SNHG20-204ENST00000566583 ARAP2Q8WZ64 1704 aa19.23■□□□□ 0.67
SNHG20-204ENST00000566583 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
SNHG20-204ENST00000566583 DPEP1P16444 411 aa19.23■□□□□ 0.67
SNHG20-204ENST00000566583 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
SNHG20-204ENST00000566583 GCC1Q96CN9 775 aa19.23■□□□□ 0.67
SNHG20-204ENST00000566583 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
SNHG20-204ENST00000566583 SASH1O94885 1247 aa19.22■□□□□ 0.67
SNHG20-204ENST00000566583 SNED1Q8TER0 1413 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 BBOX1O75936 387 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 LDHAL6AQ6ZMR3 332 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 CENPQQ7L2Z9 268 aaPredicted RBP19.21■□□□□ 0.67
SNHG20-204ENST00000566583 VGLL2Q8N8G2 317 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 SIL1Q9H173 461 aa19.21■□□□□ 0.67
SNHG20-204ENST00000566583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.21■□□□□ 0.67
SNHG20-204ENST00000566583 FER1L6Q2WGJ9 1857 aa19.2■□□□□ 0.66
SNHG20-204ENST00000566583 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
SNHG20-204ENST00000566583 RAB11FIP3O75154 756 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms