RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
SPG7-213ENST00000566221 FOXO4P98177 505 aa18.51■□□□□ 0.55
SPG7-213ENST00000566221 CCDC24Q8N4L8 307 aa18.51■□□□□ 0.55
SPG7-213ENST00000566221 KAZALD1Q96I82 304 aa18.51■□□□□ 0.55
SPG7-213ENST00000566221 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
SPG7-213ENST00000566221 BRCA1P38398 1863 aaKnown RBP18.51■□□□□ 0.55
SPG7-213ENST00000566221 RABL6Q3YEC7 729 aaPredicted RBP18.5■□□□□ 0.55
SPG7-213ENST00000566221 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
SPG7-213ENST00000566221 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
SPG7-213ENST00000566221 PDE6BP35913 854 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 MTX1Q13505 466 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 CHD4Q14839 1912 aa18.49■□□□□ 0.55
SPG7-213ENST00000566221 CSF1RP07333 972 aa18.48■□□□□ 0.55
SPG7-213ENST00000566221 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
SPG7-213ENST00000566221 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
SPG7-213ENST00000566221 LMBR1LQ6UX01 489 aa18.48■□□□□ 0.55
SPG7-213ENST00000566221 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
SPG7-213ENST00000566221 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
SPG7-213ENST00000566221 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
SPG7-213ENST00000566221 KLRG2A4D1S0 409 aaPredicted RBP18.47■□□□□ 0.55
SPG7-213ENST00000566221 CRY2Q49AN0 593 aa18.47■□□□□ 0.55
SPG7-213ENST00000566221 C3orf67Q6ZVT6 689 aa18.47■□□□□ 0.55
SPG7-213ENST00000566221 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
SPG7-213ENST00000566221 CHMP3Q9Y3E7 222 aa18.46■□□□□ 0.55
SPG7-213ENST00000566221 UTRNP46939 3433 aa18.45■□□□□ 0.54
SPG7-213ENST00000566221 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
SPG7-213ENST00000566221 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
SPG7-213ENST00000566221 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
SPG7-213ENST00000566221 GREM2Q9H772 168 aa18.45■□□□□ 0.54
SPG7-213ENST00000566221 LRRC37AA6NMS7 1700 aa18.45■□□□□ 0.54
SPG7-213ENST00000566221 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 HMMRO75330 724 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 GPR162Q16538 588 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 CD2APQ9Y5K6 639 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 COL4A1P02462 1669 aa18.44■□□□□ 0.54
SPG7-213ENST00000566221 H0YIN7 160 aa18.43■□□□□ 0.54
SPG7-213ENST00000566221 SRGNP10124 158 aa18.43■□□□□ 0.54
SPG7-213ENST00000566221 ITGA6P23229 1130 aa18.43■□□□□ 0.54
SPG7-213ENST00000566221 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
SPG7-213ENST00000566221 CCDC57Q2TAC2 916 aa18.43■□□□□ 0.54
SPG7-213ENST00000566221 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
SPG7-213ENST00000566221 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
SPG7-213ENST00000566221 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 NPR1P16066 1061 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 POLA2Q14181 598 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 C2CD5Q86YS7 1000 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 SSH3Q8TE77 659 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 RBM17Q96I25 401 aaKnown RBP18.42■□□□□ 0.54
SPG7-213ENST00000566221 CDC5LQ99459 802 aaKnown RBP18.42■□□□□ 0.54
SPG7-213ENST00000566221 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
SPG7-213ENST00000566221 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
SPG7-213ENST00000566221 TGFB2P61812 414 aa18.41■□□□□ 0.54
SPG7-213ENST00000566221 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
SPG7-213ENST00000566221 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
SPG7-213ENST00000566221 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
SPG7-213ENST00000566221 MASTLQ96GX5 879 aa18.41■□□□□ 0.54
SPG7-213ENST00000566221 RFX5P48382 616 aaPredicted RBP18.4■□□□□ 0.54
SPG7-213ENST00000566221 TAF7LQ5H9L4 462 aa18.4■□□□□ 0.54
SPG7-213ENST00000566221 CRAMP1Q96RY5 1269 aa18.4■□□□□ 0.54
SPG7-213ENST00000566221 SEC31BQ9NQW1 1179 aa18.4■□□□□ 0.54
SPG7-213ENST00000566221 CHRNA5P30532 468 aa18.39■□□□□ 0.53
SPG7-213ENST00000566221 HDAC1Q13547 482 aaPredicted RBP18.39■□□□□ 0.53
SPG7-213ENST00000566221 GRAPQ13588 217 aa18.39■□□□□ 0.53
SPG7-213ENST00000566221 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
SPG7-213ENST00000566221 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
SPG7-213ENST00000566221 ALDH1B1P30837 517 aa18.38■□□□□ 0.53
SPG7-213ENST00000566221 IGHMBP2P38935 993 aaKnown RBP18.38■□□□□ 0.53
SPG7-213ENST00000566221 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
SPG7-213ENST00000566221 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
SPG7-213ENST00000566221 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
SPG7-213ENST00000566221 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
SPG7-213ENST00000566221 DPEP1P16444 411 aa18.37■□□□□ 0.53
SPG7-213ENST00000566221 CNKSR1Q969H4 720 aa18.37■□□□□ 0.53
SPG7-213ENST00000566221 ZNF622Q969S3 477 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■□□□ 14.2
SPG7-213ENST00000566221 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
SPG7-213ENST00000566221 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
SPG7-213ENST00000566221 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
SPG7-213ENST00000566221 LTBP1Q14766 1721 aa18.36■□□□□ 0.53
SPG7-213ENST00000566221 TMC4Q7Z404 712 aa18.36■□□□□ 0.53
SPG7-213ENST00000566221 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
SPG7-213ENST00000566221 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
SPG7-213ENST00000566221 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
SPG7-213ENST00000566221 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
SPG7-213ENST00000566221 PA2G4Q9UQ80 394 aaKnown RBP18.36■□□□□ 0.53
SPG7-213ENST00000566221 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
SPG7-213ENST00000566221 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
SPG7-213ENST00000566221 CIAO1O76071 339 aa18.35■□□□□ 0.53
SPG7-213ENST00000566221 HSP90AB4PQ58FF6 505 aa18.35■□□□□ 0.53
SPG7-213ENST00000566221 SIL1Q9H173 461 aa18.35■□□□□ 0.53
SPG7-213ENST00000566221 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
SPG7-213ENST00000566221 EYA2O00167 538 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
SPG7-213ENST00000566221 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
SPG7-213ENST00000566221 BBOX1O75936 387 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms