RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 GRAPLQ8TC17 118 aaPredicted RBP24.53■■□□□ 1.52
ABCA3-204ENST00000566200 TMX4Q9H1E5 349 aaPredicted RBP24.53■■□□□ 1.52
ABCA3-204ENST00000566200 MBIPQ9NS73 344 aa24.53■■□□□ 1.52
ABCA3-204ENST00000566200 DBF4Q9UBU7 674 aaPredicted RBP24.53■■□□□ 1.52
ABCA3-204ENST00000566200 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
ABCA3-204ENST00000566200 RASSF10A6NK89 507 aa24.52■■□□□ 1.52
ABCA3-204ENST00000566200 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
ABCA3-204ENST00000566200 DUSP27Q5VZP5 1158 aa24.52■■□□□ 1.52
ABCA3-204ENST00000566200 DDX46Q7L014 1031 aaKnown RBP24.52■■□□□ 1.52
ABCA3-204ENST00000566200 MPNDQ8N594 471 aa24.52■■□□□ 1.52
ABCA3-204ENST00000566200 SUPT20HQ8NEM7 779 aa24.52■■□□□ 1.52
ABCA3-204ENST00000566200 ATP5J2-PTCD1G3V325 749 aa24.51■■□□□ 1.51
ABCA3-204ENST00000566200 KIAA2012Q0VF49 1180 aa24.51■■□□□ 1.51
ABCA3-204ENST00000566200 USP50Q70EL3 339 aaPredicted RBP24.51■■□□□ 1.51
ABCA3-204ENST00000566200 GPRC5DQ9NZD1 345 aa24.51■■□□□ 1.51
ABCA3-204ENST00000566200 TRPM7Q96QT4 1865 aa24.51■■□□□ 1.51
ABCA3-204ENST00000566200 CAPN15O75808 1086 aa24.5■■□□□ 1.51
ABCA3-204ENST00000566200 FAM89AQ96GI7 184 aa24.5■■□□□ 1.51
ABCA3-204ENST00000566200 TRAF5O00463 557 aa24.48■■□□□ 1.51
ABCA3-204ENST00000566200 GMPSP49915 693 aaPredicted RBP24.48■■□□□ 1.51
ABCA3-204ENST00000566200 DEFB115Q30KQ5 88 aa24.48■■□□□ 1.51
ABCA3-204ENST00000566200 HYPKQ9NX55 129 aa24.48■■□□□ 1.51
ABCA3-204ENST00000566200 THSD7BQ9C0I4 1608 aa24.47■■□□□ 1.51
ABCA3-204ENST00000566200 YDJCA8MPS7 323 aa24.47■■□□□ 1.51
ABCA3-204ENST00000566200 APAF1O14727 1248 aa24.47■■□□□ 1.51
ABCA3-204ENST00000566200 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
ABCA3-204ENST00000566200 CELF1Q92879 486 aaKnown RBP24.47■■□□□ 1.51
ABCA3-204ENST00000566200 ADARB2Q9NS39 739 aaKnown RBP24.47■■□□□ 1.51
ABCA3-204ENST00000566200 CST9Q5W186 159 aa24.46■■□□□ 1.51
ABCA3-204ENST00000566200 CIAPIN1Q6FI81 312 aa24.46■■□□□ 1.51
ABCA3-204ENST00000566200 WBP1LQ9NX94 342 aa24.46■■□□□ 1.51
ABCA3-204ENST00000566200 RAD17O75943 681 aa24.45■■□□□ 1.5
ABCA3-204ENST00000566200 TRIM28Q13263 835 aaKnown RBP24.45■■□□□ 1.5
ABCA3-204ENST00000566200 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
ABCA3-204ENST00000566200 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
ABCA3-204ENST00000566200 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
ABCA3-204ENST00000566200 IFT57Q9NWB7 429 aa24.45■■□□□ 1.5
ABCA3-204ENST00000566200 ABT1Q9ULW3 272 aaKnown RBP24.45■■□□□ 1.5
ABCA3-204ENST00000566200 WDR33Q9C0J8 1336 aaKnown RBP24.44■■□□□ 1.5
ABCA3-204ENST00000566200 ELL2O00472 640 aaPredicted RBP24.43■■□□□ 1.5
ABCA3-204ENST00000566200 CDHR2Q9BYE9 1310 aa24.42■■□□□ 1.5
ABCA3-204ENST00000566200 SHTN1A0MZ66 631 aa24.42■■□□□ 1.5
ABCA3-204ENST00000566200 HIRAP54198 1017 aaPredicted RBP24.42■■□□□ 1.5
ABCA3-204ENST00000566200 PRDM10Q9NQV6 1147 aa24.42■■□□□ 1.5
ABCA3-204ENST00000566200 PGAP2Q9UHJ9 254 aa24.42■■□□□ 1.5
ABCA3-204ENST00000566200 IRS4O14654 1257 aaPredicted RBP24.41■■□□□ 1.5
ABCA3-204ENST00000566200 CTCFP49711 727 aaPredicted RBP24.41■■□□□ 1.5
ABCA3-204ENST00000566200 GNAI1P63096 354 aa24.41■■□□□ 1.5
ABCA3-204ENST00000566200 TNIP1Q15025 636 aa24.41■■□□□ 1.5
ABCA3-204ENST00000566200 C8orf58Q8NAV2 365 aa24.41■■□□□ 1.5
ABCA3-204ENST00000566200 TRPM4Q8TD43 1214 aa24.41■■□□□ 1.5
ABCA3-204ENST00000566200 POLLQ9UGP5 575 aa24.41■■□□□ 1.5
ABCA3-204ENST00000566200 NSFL1CQ9UNZ2 370 aaKnown RBP24.41■■□□□ 1.5
ABCA3-204ENST00000566200 GPSM2P81274 684 aa24.4■■□□□ 1.5
ABCA3-204ENST00000566200 AIDAQ96BJ3 306 aa24.4■■□□□ 1.5
ABCA3-204ENST00000566200 RIC3Q7Z5B4 369 aa24.39■■□□□ 1.49
ABCA3-204ENST00000566200 BCL2L13Q9BXK5 485 aa24.39■■□□□ 1.49
ABCA3-204ENST00000566200 GLIS2Q9BZE0 524 aaPredicted RBP24.39■■□□□ 1.49
ABCA3-204ENST00000566200 LBX1P52954 281 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 GOLGA2Q08379 1002 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 WASHC4Q2M389 1173 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 CYP4F22Q6NT55 531 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 ZBTB38Q8NAP3 1195 aaPredicted RBP24.38■■□□□ 1.49
ABCA3-204ENST00000566200 CAPNS2Q96L46 248 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 DBNDD1Q9H9R9 158 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 CNOT7Q9UIV1 285 aaKnown RBP24.38■■□□□ 1.49
ABCA3-204ENST00000566200 ZBTB12Q9Y330 459 aaPredicted RBP24.38■■□□□ 1.49
ABCA3-204ENST00000566200 TLL2Q9Y6L7 1015 aa24.38■■□□□ 1.49
ABCA3-204ENST00000566200 RIMBP2O15034 1052 aa24.37■■□□□ 1.49
ABCA3-204ENST00000566200 HSPA8P11142 646 aaKnown RBP24.37■■□□□ 1.49
ABCA3-204ENST00000566200 CALD1Q05682 793 aaKnown RBP24.37■■□□□ 1.49
ABCA3-204ENST00000566200 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
ABCA3-204ENST00000566200 GPR101Q96P66 508 aaPredicted RBP24.37■■□□□ 1.49
ABCA3-204ENST00000566200 MYD88Q99836 296 aa24.37■■□□□ 1.49
ABCA3-204ENST00000566200 SCN9AQ15858 1988 aa24.36■■□□□ 1.49
ABCA3-204ENST00000566200 PSMD14O00487 310 aa24.36■■□□□ 1.49
ABCA3-204ENST00000566200 RPS8P62241 208 aaKnown RBP24.36■■□□□ 1.49
ABCA3-204ENST00000566200 SEC31BQ9NQW1 1179 aa24.36■■□□□ 1.49
ABCA3-204ENST00000566200 KCNQ5Q9NR82 932 aa24.36■■□□□ 1.49
ABCA3-204ENST00000566200 C6orf229H3BNL8 230 aa24.35■■□□□ 1.49
ABCA3-204ENST00000566200 MAP2K1Q02750 393 aaPredicted RBP24.35■■□□□ 1.49
ABCA3-204ENST00000566200 MICALL2Q8IY33 904 aa24.35■■□□□ 1.49
ABCA3-204ENST00000566200 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
ABCA3-204ENST00000566200 TBC1D16Q8TBP0 767 aa24.35■■□□□ 1.49
ABCA3-204ENST00000566200 ZC3H15Q8WU90 426 aaKnown RBP24.35■■□□□ 1.49
ABCA3-204ENST00000566200 RTL9Q8NET4 1388 aa24.34■■□□□ 1.49
ABCA3-204ENST00000566200 CCDC191Q8NCU4 936 aa24.34■■□□□ 1.49
ABCA3-204ENST00000566200 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
ABCA3-204ENST00000566200 ECE2O60344 883 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 CELF2O95319 508 aaKnown RBP24.33■■□□□ 1.49
ABCA3-204ENST00000566200 EGFRP00533 1210 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 PCCAP05165 728 aaPredicted RBP24.33■■□□□ 1.49
ABCA3-204ENST00000566200 GRM1Q13255 1194 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 DOK7Q18PE1 504 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 PAXIP1Q6ZW49 1069 aaPredicted RBP24.33■■□□□ 1.49
ABCA3-204ENST00000566200 SAPCD2Q86UD0 394 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 DPF2Q92785 391 aa24.33■■□□□ 1.49
ABCA3-204ENST00000566200 ECE1P42892 770 aa24.32■■□□□ 1.48
ABCA3-204ENST00000566200 SAMD7Q7Z3H4 446 aa24.32■■□□□ 1.48
ABCA3-204ENST00000566200 METTL22Q9BUU2 404 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms