RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 MEIS3Q99687 375 aa17.49■□□□□ 0.39
CCNDBP1-206ENST00000565296 PIM2Q9P1W9 311 aa17.49■□□□□ 0.39
CCNDBP1-206ENST00000565296 FOXO4P98177 505 aa17.49■□□□□ 0.39
CCNDBP1-206ENST00000565296 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
CCNDBP1-206ENST00000565296 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-206ENST00000565296 CTSWP56202 376 aa17.48■□□□□ 0.39
CCNDBP1-206ENST00000565296 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
CCNDBP1-206ENST00000565296 HSP90B1P14625 803 aaKnown RBP17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■□□□□ 9
CCNDBP1-206ENST00000565296 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 LAMB2P55268 1798 aa17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 CSF1RP07333 972 aa17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
CCNDBP1-206ENST00000565296 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 DALRD3Q5D0E6 543 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 SLC51AQ86UW1 340 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 GREM2Q9H772 168 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 DLEC1Q9Y238 1755 aa17.46■□□□□ 0.39
CCNDBP1-206ENST00000565296 COL4A1P02462 1669 aa17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 MS4A1P11836 297 aa17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 CNKSR1Q969H4 720 aa17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 BCS1LQ9Y276 419 aa17.45■□□□□ 0.38
CCNDBP1-206ENST00000565296 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 ANKRD44Q8N8A2 993 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 COG6Q9Y2V7 657 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 LMBR1LQ6UX01 489 aa17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-206ENST00000565296 RTL9Q8NET4 1388 aa17.43■□□□□ 0.38
CCNDBP1-206ENST00000565296 GRAPQ13588 217 aa17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 GNAI3P08754 354 aa17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 GPR162Q16538 588 aa17.42■□□□□ 0.38
CCNDBP1-206ENST00000565296 C21orf2O43822 256 aa17.41■□□□□ 0.38
CCNDBP1-206ENST00000565296 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
CCNDBP1-206ENST00000565296 SLX4Q8IY92 1834 aa17.41■□□□□ 0.38
CCNDBP1-206ENST00000565296 BBOX1O75936 387 aa17.4■□□□□ 0.38
CCNDBP1-206ENST00000565296 ITGA6P23229 1130 aa17.4■□□□□ 0.38
CCNDBP1-206ENST00000565296 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
CCNDBP1-206ENST00000565296 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
CCNDBP1-206ENST00000565296 GNAI2P04899 355 aa17.39■□□□□ 0.37
CCNDBP1-206ENST00000565296 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
CCNDBP1-206ENST00000565296 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 TAF1P21675 1872 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 SNED1Q8TER0 1413 aa17.38■□□□□ 0.37
CCNDBP1-206ENST00000565296 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
CCNDBP1-206ENST00000565296 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
CCNDBP1-206ENST00000565296 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
CCNDBP1-206ENST00000565296 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
CCNDBP1-206ENST00000565296 HDAC5Q9UQL6 1122 aa17.37■□□□□ 0.37
CCNDBP1-206ENST00000565296 MYH3P11055 1940 aa17.36■□□□□ 0.37
CCNDBP1-206ENST00000565296 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
CCNDBP1-206ENST00000565296 CCDC57Q2TAC2 916 aa17.36■□□□□ 0.37
CCNDBP1-206ENST00000565296 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
CCNDBP1-206ENST00000565296 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
CCNDBP1-206ENST00000565296 MTX1Q13505 466 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 KLHDC4Q8TBB5 520 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 NFKBIEO00221 500 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
CCNDBP1-206ENST00000565296 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
CCNDBP1-206ENST00000565296 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
CCNDBP1-206ENST00000565296 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
CCNDBP1-206ENST00000565296 CACNA1SQ13698 1873 aa17.34■□□□□ 0.37
CCNDBP1-206ENST00000565296 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.37
CCNDBP1-206ENST00000565296 SOGA3Q5TF21 947 aa17.33■□□□□ 0.37
CCNDBP1-206ENST00000565296 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.37
CCNDBP1-206ENST00000565296 SRGAP3O43295 1099 aa17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 PRELPP51888 382 aa17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 PTPN12Q05209 780 aaKnown RBP17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
CCNDBP1-206ENST00000565296 GPSM2P81274 684 aa17.32■□□□□ 0.36
CCNDBP1-206ENST00000565296 RASSF7Q02833 373 aa17.32■□□□□ 0.36
CCNDBP1-206ENST00000565296 CEP85Q6P2H3 762 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms