RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 GPTP24298 496 aa17.5■□□□□ 0.39
RPAP1-206ENST00000564934 SUSD4Q5VX71 490 aa17.5■□□□□ 0.39
RPAP1-206ENST00000564934 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
RPAP1-206ENST00000564934 POLR2AP24928 1970 aaKnown RBP17.49■□□□□ 0.39
RPAP1-206ENST00000564934 ABCC4O15439 1325 aa17.49■□□□□ 0.39
RPAP1-206ENST00000564934 MPNDQ8N594 471 aa17.49■□□□□ 0.39
RPAP1-206ENST00000564934 ERVV-1B6SEH8 477 aa17.48■□□□□ 0.39
RPAP1-206ENST00000564934 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
RPAP1-206ENST00000564934 DPF2Q92785 391 aa17.48■□□□□ 0.39
RPAP1-206ENST00000564934 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
RPAP1-206ENST00000564934 NUP98P52948 1817 aa17.47■□□□□ 0.39
RPAP1-206ENST00000564934 U2SURPO15042 1029 aaKnown RBP17.47■□□□□ 0.39
RPAP1-206ENST00000564934 NTSR2O95665 410 aa17.47■□□□□ 0.39
RPAP1-206ENST00000564934 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
RPAP1-206ENST00000564934 GPR25O00155 361 aa17.46■□□□□ 0.39
RPAP1-206ENST00000564934 PSMD14O00487 310 aa17.46■□□□□ 0.39
RPAP1-206ENST00000564934 SULF1Q8IWU6 871 aa17.46■□□□□ 0.39
RPAP1-206ENST00000564934 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
RPAP1-206ENST00000564934 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
RPAP1-206ENST00000564934 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
RPAP1-206ENST00000564934 SP8Q8IXZ3 490 aa17.45■□□□□ 0.38
RPAP1-206ENST00000564934 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
RPAP1-206ENST00000564934 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
RPAP1-206ENST00000564934 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
RPAP1-206ENST00000564934 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
RPAP1-206ENST00000564934 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
RPAP1-206ENST00000564934 TRIOBPQ9H2D6 2365 aa17.44■□□□□ 0.38
RPAP1-206ENST00000564934 DLL1O00548 723 aa17.43■□□□□ 0.38
RPAP1-206ENST00000564934 BBOX1O75936 387 aa17.43■□□□□ 0.38
RPAP1-206ENST00000564934 KIF4BQ2VIQ3 1234 aa17.43■□□□□ 0.38
RPAP1-206ENST00000564934 MCM10Q7L590 875 aa17.43■□□□□ 0.38
RPAP1-206ENST00000564934 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
RPAP1-206ENST00000564934 COLQQ9Y215 455 aaPredicted RBP17.43■□□□□ 0.38
RPAP1-206ENST00000564934 ASTN2O75129 1339 aaPredicted RBP17.43■□□□□ 0.38
RPAP1-206ENST00000564934 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
RPAP1-206ENST00000564934 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
RPAP1-206ENST00000564934 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
RPAP1-206ENST00000564934 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
RPAP1-206ENST00000564934 DBNDD1Q9H9R9 158 aa17.42■□□□□ 0.38
RPAP1-206ENST00000564934 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
RPAP1-206ENST00000564934 SZT2Q5T011 3432 aa17.42■□□□□ 0.38
RPAP1-206ENST00000564934 KIAA0100Q14667 2235 aaKnown RBP17.41■□□□□ 0.38
RPAP1-206ENST00000564934 HTTP42858 3142 aa17.41■□□□□ 0.38
RPAP1-206ENST00000564934 RPS12P25398 132 aaKnown RBP17.41■□□□□ 0.38
RPAP1-206ENST00000564934 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
RPAP1-206ENST00000564934 FKTNO75072 461 aa17.4■□□□□ 0.38
RPAP1-206ENST00000564934 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
RPAP1-206ENST00000564934 FKBP1BP68106 108 aa17.4■□□□□ 0.38
RPAP1-206ENST00000564934 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
RPAP1-206ENST00000564934 CEP290O15078 2479 aa17.4■□□□□ 0.38
RPAP1-206ENST00000564934 MYL6BP14649 208 aa17.39■□□□□ 0.37
RPAP1-206ENST00000564934 SLC10A5Q5PT55 438 aa17.39■□□□□ 0.37
RPAP1-206ENST00000564934 MOB2Q70IA6 237 aa17.39■□□□□ 0.37
RPAP1-206ENST00000564934 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
RPAP1-206ENST00000564934 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
RPAP1-206ENST00000564934 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
RPAP1-206ENST00000564934 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
RPAP1-206ENST00000564934 TM4SF4P48230 202 aa17.38■□□□□ 0.37
RPAP1-206ENST00000564934 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
RPAP1-206ENST00000564934 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
RPAP1-206ENST00000564934 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
RPAP1-206ENST00000564934 ANGEL2Q5VTE6 544 aaKnown RBP17.38■□□□□ 0.37
RPAP1-206ENST00000564934 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
RPAP1-206ENST00000564934 GIGYF2Q6Y7W6 1299 aaKnown RBP17.38■□□□□ 0.37
RPAP1-206ENST00000564934 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
RPAP1-206ENST00000564934 R3HDMLQ9H3Y0 253 aa17.38■□□□□ 0.37
RPAP1-206ENST00000564934 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
RPAP1-206ENST00000564934 GRAPQ13588 217 aa17.37■□□□□ 0.37
RPAP1-206ENST00000564934 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
RPAP1-206ENST00000564934 BRCA2P51587 3418 aa17.37■□□□□ 0.37
RPAP1-206ENST00000564934 CUL9Q8IWT3 2517 aa17.37■□□□□ 0.37
RPAP1-206ENST00000564934 CENPFP49454 3210 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 UBE2Q2LH0YL09 131 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 RIMBP2O15034 1052 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 ECE2O60344 883 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
RPAP1-206ENST00000564934 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
RPAP1-206ENST00000564934 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
RPAP1-206ENST00000564934 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 TRIM17Q9Y577 477 aa17.36■□□□□ 0.37
RPAP1-206ENST00000564934 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
RPAP1-206ENST00000564934 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
RPAP1-206ENST00000564934 SLC17A8Q8NDX2 589 aa17.35■□□□□ 0.37
RPAP1-206ENST00000564934 CFHR5Q9BXR6 569 aa17.35■□□□□ 0.37
RPAP1-206ENST00000564934 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
RPAP1-206ENST00000564934 LAMB2P55268 1798 aa17.35■□□□□ 0.37
RPAP1-206ENST00000564934 RBBP6Q7Z6E9 1792 aaKnown RBP17.35■□□□□ 0.37
RPAP1-206ENST00000564934 LRRC37AA6NMS7 1700 aa17.34■□□□□ 0.37
RPAP1-206ENST00000564934 SREBF2Q12772 1141 aa17.34■□□□□ 0.37
RPAP1-206ENST00000564934 SCARF1Q14162 830 aa17.34■□□□□ 0.37
RPAP1-206ENST00000564934 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
RPAP1-206ENST00000564934 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.37
RPAP1-206ENST00000564934 OTOP1Q7RTM1 612 aa17.33■□□□□ 0.36
RPAP1-206ENST00000564934 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
RPAP1-206ENST00000564934 SCAF8Q9UPN6 1271 aaKnown RBP17.33■□□□□ 0.36
RPAP1-206ENST00000564934 TAF1P21675 1872 aa17.33■□□□□ 0.36
RPAP1-206ENST00000564934 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
RPAP1-206ENST00000564934 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
RPAP1-206ENST00000564934 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
RPAP1-206ENST00000564934 POLLQ9UGP5 575 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms