RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 ZSCAN26Q16670 478 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 GIMAP6Q6P9H5 292 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 SRLQ86TD4 932 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 SMARCE1Q969G3 411 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 NRBP1Q9UHY1 535 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 LRRFIP2Q9Y608 721 aaKnown RBP10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 COL14A1Q05707 1796 aaKnown RBP10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 SPATA31A5Q5VU36 1347 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 SPATA31A7Q8IWB4 1347 aa10.83□□□□□ -0.68
AC138869.3-201ENST00000563960 PATL2C9JE40 543 aaKnown RBP10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 PNMA6AP0CW24 399 aaPredicted RBP10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 TPRNQ4KMQ1 711 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 TEX35Q5T0J7 233 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 ZSCAN25Q6NSZ9 544 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 DRC1Q96MC2 740 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 EXOC6BQ9Y2D4 811 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
AC138869.3-201ENST00000563960 NPHP1O15259 732 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 POLR3GO15318 223 aaPredicted RBP10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 PHKG2P15735 406 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 VPS72Q15906 364 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 ABCC6O95255 1503 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 MAP3K5Q99683 1374 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 ELL2O00472 640 aaPredicted RBP10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 CLCN6P51797 869 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 SART3Q15020 963 aaKnown RBP10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 AKAP4Q5JQC9 854 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 PACS2Q86VP3 889 aa10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 RRP15Q9Y3B9 282 aaKnown RBP10.81□□□□□ -0.68
AC138869.3-201ENST00000563960 EXOC5O00471 708 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 CUL4AQ13619 759 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 A0A1B0GUL7 405 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 USP27XA6NNY8 438 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 FAM182BQ5T319 152 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 IFNL2Q8IZJ0 200 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 C1orf115Q9H7X2 142 aa10.8□□□□□ -0.68
AC138869.3-201ENST00000563960 SLU7O95391 586 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 NEK4P51957 841 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 TPM4P67936 248 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 SIRT2Q8IXJ6 389 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 GOLGA6L1Q8N7Z2 621 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 CACTINQ8WUQ7 758 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 GJD4Q96KN9 370 aaPredicted RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 MBIPQ9NS73 344 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 CNPY2Q9Y2B0 182 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 PLEKHG2Q9H7P9 1386 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 HTATSF1O43719 755 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 ERCC6LQ2NKX8 1250 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 TTC22Q5TAA0 569 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 NYAP1Q6ZVC0 841 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 DONSONQ9NYP3 566 aa10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 RPAP1Q9BWH6 1393 aaPredicted RBP10.79□□□□□ -0.68
AC138869.3-201ENST00000563960 EP400Q96L91 3159 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 ZRANB2O95218 330 aaKnown RBP eCLIP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 UBE2HP62256 183 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 DDB1Q16531 1140 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 ALDH1L2Q3SY69 923 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 RNF20Q5VTR2 975 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 EGFL6Q8IUX8 553 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 HOMEZQ8IX15 550 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 DRC7Q8IY82 874 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 TEFQ10587 303 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 PTPN14Q15678 1187 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 SRCIN1Q9C0H9 1055 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 ZCCHC17Q9NP64 241 aaKnown RBP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 TRPC5Q9UL62 973 aaPredicted RBP10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 DLG5Q8TDM6 1919 aa10.78□□□□□ -0.68
AC138869.3-201ENST00000563960 ZBTB7BO15156 539 aaPredicted RBP10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 KCNQ3O43525 872 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 GOLGA5Q8TBA6 731 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 UBXN6Q9BZV1 441 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 CXorf56Q9H5V9 222 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 WDR33Q9C0J8 1336 aaKnown RBP10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 CHL1O00533 1208 aa10.77□□□□□ -0.69
AC138869.3-201ENST00000563960 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms