RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NYXQ9GZU5 481 aa27.05■■□□□ 1.92
LINC01960-201ENST00000563759 GTF2E1P29083 439 aaPredicted RBP27.04■■□□□ 1.92
LINC01960-201ENST00000563759 EN1Q05925 392 aaPredicted RBP27.04■■□□□ 1.92
LINC01960-201ENST00000563759 CLASRPQ8N2M8 674 aaKnown RBP27.04■■□□□ 1.92
LINC01960-201ENST00000563759 CARMIL3Q8ND23 1372 aa27.03■■□□□ 1.92
LINC01960-201ENST00000563759 EZH2Q15910 746 aaKnown RBP27.03■■□□□ 1.92
LINC01960-201ENST00000563759 TAF7LQ5H9L4 462 aa27.03■■□□□ 1.92
LINC01960-201ENST00000563759 NBPF5PQ86XG9 351 aaPredicted RBP27.03■■□□□ 1.92
LINC01960-201ENST00000563759 SASH1O94885 1247 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 GREM2Q9H772 168 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 MX1P20591 662 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 BAG6P46379 1132 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 ERFEQ4G0M1 354 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 CAMKK2Q96RR4 588 aa27.02■■□□□ 1.92
LINC01960-201ENST00000563759 AK9Q5TCS8 1911 aa27.01■■□□□ 1.91
LINC01960-201ENST00000563759 GYS1P13807 737 aa27.01■■□□□ 1.91
LINC01960-201ENST00000563759 ITGA6P23229 1130 aa27.01■■□□□ 1.91
LINC01960-201ENST00000563759 ZNF594Q96JF6 807 aaPredicted RBP27.01■■□□□ 1.91
LINC01960-201ENST00000563759 SALL3Q9BXA9 1300 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 ANKRD18BA2A2Z9 1011 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 NPHP1O15259 732 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 BMP2KLQ5H9B9 411 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 QSER1Q2KHR3 1735 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 MSH5O43196 834 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 PDE1AP54750 535 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 NFIXQ14938 502 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 C8orf34Q49A92 452 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 BACH2Q9BYV9 841 aa27■■□□□ 1.91
LINC01960-201ENST00000563759 TPTE2Q6XPS3 522 aa26.99■■□□□ 1.91
LINC01960-201ENST00000563759 FLAD1Q8NFF5 587 aa26.99■■□□□ 1.91
LINC01960-201ENST00000563759 ABCC12Q96J65 1359 aa26.99■■□□□ 1.91
LINC01960-201ENST00000563759 EYA2O00167 538 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 CCDC152Q4G0S7 254 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 TTC22Q5TAA0 569 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 LRP5O75197 1615 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 IL15P40933 162 aaPredicted RBP26.98■■□□□ 1.91
LINC01960-201ENST00000563759 AACSQ86V21 672 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 OSBPL3Q9H4L5 887 aa26.98■■□□□ 1.91
LINC01960-201ENST00000563759 CIAO1O76071 339 aa26.97■■□□□ 1.91
LINC01960-201ENST00000563759 IFIT2P09913 472 aaKnown RBP26.97■■□□□ 1.91
LINC01960-201ENST00000563759 TFCP2Q12800 502 aa26.96■■□□□ 1.91
LINC01960-201ENST00000563759 TSHZ3Q63HK5 1081 aa26.96■■□□□ 1.91
LINC01960-201ENST00000563759 ATG9AQ7Z3C6 839 aa26.96■■□□□ 1.91
LINC01960-201ENST00000563759 FBXO3Q9UK99 471 aa26.96■■□□□ 1.91
LINC01960-201ENST00000563759 TNRC6CQ9HCJ0 1690 aaKnown RBP26.96■■□□□ 1.91
LINC01960-201ENST00000563759 LRRC24Q50LG9 513 aa26.96■■□□□ 1.91
LINC01960-201ENST00000563759 COL23A1Q86Y22 540 aaPredicted RBP26.96■■□□□ 1.91
LINC01960-201ENST00000563759 TAF1P21675 1872 aa26.95■■□□□ 1.91
LINC01960-201ENST00000563759 GSPT1P15170 499 aaKnown RBP26.95■■□□□ 1.9
LINC01960-201ENST00000563759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.95■■□□□ 1.9
LINC01960-201ENST00000563759 AOX1Q06278 1338 aa26.95■■□□□ 1.9
LINC01960-201ENST00000563759 RTL9Q8NET4 1388 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 CNBD1Q8NA66 436 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 GPATCH3Q96I76 525 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 PUS3Q9BZE2 481 aaKnown RBP26.94■■□□□ 1.9
LINC01960-201ENST00000563759 STAP2Q9UGK3 403 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 PNPLA7Q6ZV29 1317 aa26.94■■□□□ 1.9
LINC01960-201ENST00000563759 SLC10A5Q5PT55 438 aa26.93■■□□□ 1.9
LINC01960-201ENST00000563759 LDHAL6AQ6ZMR3 332 aa26.93■■□□□ 1.9
LINC01960-201ENST00000563759 EAF2Q96CJ1 260 aaPredicted RBP26.93■■□□□ 1.9
LINC01960-201ENST00000563759 ANO8Q9HCE9 1232 aaPredicted RBP26.93■■□□□ 1.9
LINC01960-201ENST00000563759 STK32BQ9NY57 414 aa26.93■■□□□ 1.9
LINC01960-201ENST00000563759 TNNI3KQ59H18 835 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 CNNM1Q9NRU3 951 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 FPGT-TNNI3KV9GXZ4 949 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 SLC15A2Q16348 729 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 NLRP3Q96P20 1036 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 CCDC8Q9H0W5 538 aaPredicted RBP26.91■■□□□ 1.9
LINC01960-201ENST00000563759 TTC41PQ6P2S7 1318 aa26.91■■□□□ 1.9
LINC01960-201ENST00000563759 CCDC24Q8N4L8 307 aa26.9■■□□□ 1.9
LINC01960-201ENST00000563759 SEC31BQ9NQW1 1179 aa26.9■■□□□ 1.9
LINC01960-201ENST00000563759 RIC1Q4ADV7 1423 aa26.9■■□□□ 1.9
LINC01960-201ENST00000563759 SF3B3Q15393 1217 aaKnown RBP26.89■■□□□ 1.9
LINC01960-201ENST00000563759 C3orf67Q6ZVT6 689 aa26.89■■□□□ 1.9
LINC01960-201ENST00000563759 CEP126Q9P2H0 1117 aa26.89■■□□□ 1.9
LINC01960-201ENST00000563759 ZNF609O15014 1411 aa26.89■■□□□ 1.9
LINC01960-201ENST00000563759 TM4SF1P30408 202 aa26.89■■□□□ 1.89
LINC01960-201ENST00000563759 NLGN1Q8N2Q7 840 aa26.89■■□□□ 1.89
LINC01960-201ENST00000563759 SERPINB2P05120 415 aa26.88■■□□□ 1.89
LINC01960-201ENST00000563759 CCDC125Q86Z20 511 aa26.88■■□□□ 1.89
LINC01960-201ENST00000563759 CDC5LQ99459 802 aaKnown RBP26.88■■□□□ 1.89
LINC01960-201ENST00000563759 MPHOSPH8Q99549 860 aa26.88■■□□□ 1.89
LINC01960-201ENST00000563759 ECHDC1Q9NTX5 307 aa26.88■■□□□ 1.89
LINC01960-201ENST00000563759 TLR7Q9NYK1 1049 aaKnown RBP26.88■■□□□ 1.89
LINC01960-201ENST00000563759 A0A1B0GUL6 1792 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 ERC2O15083 957 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 IGHMBP2P38935 993 aaKnown RBP26.87■■□□□ 1.89
LINC01960-201ENST00000563759 PRR5LQ6MZQ0 368 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 GPR108Q9NPR9 543 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 SDSP20132 328 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 ST5P78524 1137 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 DDR1Q08345 913 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 METTL24Q5JXM2 366 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 PI4K2BQ8TCG2 481 aa26.87■■□□□ 1.89
LINC01960-201ENST00000563759 NRXN2Q9P2S2 1712 aa26.86■■□□□ 1.89
LINC01960-201ENST00000563759 RIPOR2Q9Y4F9 1068 aa26.86■■□□□ 1.89
LINC01960-201ENST00000563759 COL4A1P02462 1669 aa26.86■■□□□ 1.89
LINC01960-201ENST00000563759 POLRMTO00411 1230 aaKnown RBP26.85■■□□□ 1.89
LINC01960-201ENST00000563759 GLRX3O76003 335 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms