RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-203ENST00000562609 KRBA2Q6ZNG9 492 aa16.53■□□□□ 0.24
GTF3C1-203ENST00000562609 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
GTF3C1-203ENST00000562609 FHOD1Q9Y613 1164 aa16.53■□□□□ 0.24
GTF3C1-203ENST00000562609 KIF1AQ12756 1690 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 PDE1AP54750 535 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 GYS2P54840 703 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 BEND3Q5T5X7 828 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.24
GTF3C1-203ENST00000562609 POLR3GO15318 223 aaPredicted RBP16.52■□□□□ 0.23
GTF3C1-203ENST00000562609 MYL6BP14649 208 aa16.52■□□□□ 0.23
GTF3C1-203ENST00000562609 MCCP23508 829 aa16.52■□□□□ 0.23
GTF3C1-203ENST00000562609 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 MMP14P50281 582 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 TEX35Q5T0J7 233 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 MEGF6O75095 1541 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 SPATA31A3Q5VYP0 1347 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 ADCY9O60503 1353 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 SURF6O75683 361 aaKnown RBP16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 ZNF75DP51815 510 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 MYO1CO00159 1063 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 PHKG2P15735 406 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
GTF3C1-203ENST00000562609 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 CYP27B1O15528 508 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 LCMT1Q9UIC8 334 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 MRVI1Q9Y6F6 885 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
GTF3C1-203ENST00000562609 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 HOXB7P09629 217 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 H2AFXP16104 143 aaPredicted RBP16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 CASQ1P31415 396 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 PSEN1P49768 467 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 TYRO3Q06418 890 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 CAMK4Q16566 473 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 ERCC6LQ2NKX8 1250 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 PLA2G4DQ86XP0 818 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 STX6O43752 255 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 CLCN6P51797 869 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
GTF3C1-203ENST00000562609 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 F13A1P00488 732 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 SYT1P21579 422 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 ICE2Q659A1 982 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 NYAP1Q6ZVC0 841 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 DNM1Q05193 864 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 SLAIN2Q9P270 581 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
GTF3C1-203ENST00000562609 ANAPC15P60006 121 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ST5P78524 1137 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
GTF3C1-203ENST00000562609 ARID5BQ14865 1188 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 ZSCAN26Q16670 478 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 SMARCE1Q969G3 411 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 APPP05067 770 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 TPM4P67936 248 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 CKAP2LQ8IYA6 745 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 DCCP43146 1447 aa16.46■□□□□ 0.23
GTF3C1-203ENST00000562609 RAD50Q92878 1312 aa16.46■□□□□ 0.22
GTF3C1-203ENST00000562609 PDIA6Q15084 440 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms