RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 DDX46Q7L014 1031 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 TTLL11Q8NHH1 800 aa15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 LAMB2P55268 1798 aa15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 ABCC4O15439 1325 aa15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 CSF1RP07333 972 aa15.09■□□□□ 0.01
RABGGTA-218ENST00000560777 CTSWP56202 376 aa15.09■□□□□ 0.01
RABGGTA-218ENST00000560777 FOXO4P98177 505 aa15.09■□□□□ 0.01
RABGGTA-218ENST00000560777 CLUAP1Q96AJ1 413 aa15.09■□□□□ 0.01
RABGGTA-218ENST00000560777 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-218ENST00000560777 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0.01
RABGGTA-218ENST00000560777 BBOX1O75936 387 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 GRAPQ13588 217 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 CCDC152Q4G0S7 254 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 OLFM4Q6UX06 510 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
RABGGTA-218ENST00000560777 KAZALD1Q96I82 304 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
RABGGTA-218ENST00000560777 SLC51AQ86UW1 340 aa15.07■□□□□ 0
RABGGTA-218ENST00000560777 CELF1Q92879 486 aaKnown RBP15.07■□□□□ 0
RABGGTA-218ENST00000560777 SUCLG2Q96I99 432 aa15.07■□□□□ 0
RABGGTA-218ENST00000560777 GREM2Q9H772 168 aa15.07■□□□□ 0
RABGGTA-218ENST00000560777 TAF1P21675 1872 aa15.06■□□□□ 0
RABGGTA-218ENST00000560777 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
RABGGTA-218ENST00000560777 RLBP1P12271 317 aa15.06■□□□□ 0
RABGGTA-218ENST00000560777 RPS8P62241 208 aaKnown RBP15.06■□□□□ 0
RABGGTA-218ENST00000560777 TMEM57Q8N5G2 664 aa15.06■□□□□ 0
RABGGTA-218ENST00000560777 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
RABGGTA-218ENST00000560777 CACNA1SQ13698 1873 aa15.06■□□□□ 0
RABGGTA-218ENST00000560777 NFKBIEO00221 500 aa15.05■□□□□ -0
RABGGTA-218ENST00000560777 PLIN1O60240 522 aa15.05■□□□□ -0
RABGGTA-218ENST00000560777 SOGA3Q5TF21 947 aa15.05■□□□□ -0
RABGGTA-218ENST00000560777 LMBR1LQ6UX01 489 aa15.05■□□□□ -0
RABGGTA-218ENST00000560777 SP8Q8IXZ3 490 aa15.05■□□□□ -0
RABGGTA-218ENST00000560777 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ -0
RABGGTA-218ENST00000560777 COL4A1P02462 1669 aa15.04■□□□□ -0
RABGGTA-218ENST00000560777 RTL9Q8NET4 1388 aa15.04■□□□□ -0
RABGGTA-218ENST00000560777 CCDC93Q567U6 631 aa15.04■□□□□ -0
RABGGTA-218ENST00000560777 CC2D2BQ6DHV5 1058 aa15.04■□□□□ -0
RABGGTA-218ENST00000560777 ITGA6P23229 1130 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 PRELPP51888 382 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 RASSF7Q02833 373 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 FAM161AQ3B820 660 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 RABL6Q3YEC7 729 aaPredicted RBP15.03■□□□□ -0
RABGGTA-218ENST00000560777 TMC4Q7Z404 712 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
RABGGTA-218ENST00000560777 RTKN2Q8IZC4 609 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 MEIS3Q99687 375 aa15.03■□□□□ -0
RABGGTA-218ENST00000560777 BICC1Q9H694 974 aaKnown RBP15.03■□□□□ -0
RABGGTA-218ENST00000560777 SNED1Q8TER0 1413 aa15.02■□□□□ -0
RABGGTA-218ENST00000560777 MYH3P11055 1940 aa15.02■□□□□ -0
RABGGTA-218ENST00000560777 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
RABGGTA-218ENST00000560777 ANKRD18AQ8IVF6 992 aa15.02■□□□□ -0
RABGGTA-218ENST00000560777 ANKRD44Q8N8A2 993 aa15.02■□□□□ -0
RABGGTA-218ENST00000560777 PANK1Q8TE04 598 aa15.02■□□□□ -0
RABGGTA-218ENST00000560777 CDC5LQ99459 802 aaKnown RBP15.02■□□□□ -0
RABGGTA-218ENST00000560777 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 FKBP4Q02790 459 aaKnown RBP eCLIP15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 IFIT5Q13325 482 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 GRIPAP1Q4V328 841 aa15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 TMX4Q9H1E5 349 aaPredicted RBP15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 TAOK3Q9H2K8 898 aa15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 FER1L6Q2WGJ9 1857 aa15.01□□□□□ -0.01
RABGGTA-218ENST00000560777 ANKRD18BA2A2Z9 1011 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 ZBTB7BO15156 539 aaPredicted RBP15□□□□□ -0.01
RABGGTA-218ENST00000560777 GNAI3P08754 354 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 MS4A1P11836 297 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 LMNB1P20700 586 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 C9orf131Q5VYM1 1079 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 PSMD1Q99460 953 aa15□□□□□ -0.01
RABGGTA-218ENST00000560777 BSDC1Q9NW68 430 aaPredicted RBP15□□□□□ -0.01
RABGGTA-218ENST00000560777 LRRFIP2Q9Y608 721 aaKnown RBP15□□□□□ -0.01
RABGGTA-218ENST00000560777 GPSM2P81274 684 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 ITPRIPQ8IWB1 547 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 MPNDQ8N594 471 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 ZNF594Q96JF6 807 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 ZNF277Q9NRM2 450 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 NSFL1CQ9UNZ2 370 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 CHD4Q14839 1912 aa14.99□□□□□ -0.01
RABGGTA-218ENST00000560777 SBF1O95248 1867 aa14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 IGHMBP2P38935 993 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 DPP8Q6V1X1 898 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 RTFDC1Q9BY42 306 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 MINPP1Q9UNW1 487 aa14.98□□□□□ -0.01
RABGGTA-218ENST00000560777 MPHOSPH8Q99549 860 aa14.97□□□□□ -0.01
RABGGTA-218ENST00000560777 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
RABGGTA-218ENST00000560777 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
RABGGTA-218ENST00000560777 GNAI2P04899 355 aa14.96□□□□□ -0.01
RABGGTA-218ENST00000560777 YY1P25490 414 aa14.96□□□□□ -0.01
RABGGTA-218ENST00000560777 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-218ENST00000560777 MVPQ14764 893 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-218ENST00000560777 POLLQ9UGP5 575 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms