RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
SNRPA1-212ENST00000560496 APAF1O14727 1248 aa13.21□□□□□ -0.29
SNRPA1-212ENST00000560496 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-212ENST00000560496 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-212ENST00000560496 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
SNRPA1-212ENST00000560496 MKRN1Q9UHC7 482 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-212ENST00000560496 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-212ENST00000560496 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
SNRPA1-212ENST00000560496 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 EPS15P42566 896 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
SNRPA1-212ENST00000560496 TMEM88BA6NKF7 163 aa13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 BBOX1O75936 387 aa13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 GNAI1P63096 354 aa13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
SNRPA1-212ENST00000560496 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 CXCL9Q07325 125 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 MPNDQ8N594 471 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 C8orf58Q8NAV2 365 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
SNRPA1-212ENST00000560496 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 FMR1Q06787 632 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
SNRPA1-212ENST00000560496 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 VEGFBP49765 207 aa13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 TMX4Q9H1E5 349 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-212ENST00000560496 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-212ENST00000560496 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
SNRPA1-212ENST00000560496 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-212ENST00000560496 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-212ENST00000560496 MYD88Q99836 296 aa13.14□□□□□ -0.31
SNRPA1-212ENST00000560496 ZNF609O15014 1411 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 SHTN1A0MZ66 631 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 FOXN1O15353 648 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 RAD17O75943 681 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 GPSM2P81274 684 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
SNRPA1-212ENST00000560496 TRAF5O00463 557 aa13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 POLLQ9UGP5 575 aa13.12□□□□□ -0.31
SNRPA1-212ENST00000560496 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 CST9Q5W186 159 aa13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
SNRPA1-212ENST00000560496 PSMD14O00487 310 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 ECE2O60344 883 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 IL16Q14005 1332 aa13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-212ENST00000560496 PDE8AO60658 829 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 TNIP1Q15025 636 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 JARID2Q92833 1246 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-212ENST00000560496 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms