RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 CRY2Q49AN0 593 aa14.36□□□□□ -0.11
RORA-212ENST00000560004 GNAI2P04899 355 aa14.35□□□□□ -0.11
RORA-212ENST00000560004 GTF2E1P29083 439 aaPredicted RBP14.35□□□□□ -0.11
RORA-212ENST00000560004 BRIP1Q9BX63 1249 aa14.35□□□□□ -0.11
RORA-212ENST00000560004 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
RORA-212ENST00000560004 NPHP1O15259 732 aa14.34□□□□□ -0.11
RORA-212ENST00000560004 CSF1RP07333 972 aa14.34□□□□□ -0.11
RORA-212ENST00000560004 SF3B3Q15393 1217 aaKnown RBP14.34□□□□□ -0.11
RORA-212ENST00000560004 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
RORA-212ENST00000560004 TTLL11Q8NHH1 800 aa14.34□□□□□ -0.11
RORA-212ENST00000560004 MTX1Q13505 466 aa14.33□□□□□ -0.12
RORA-212ENST00000560004 CEP85Q6P2H3 762 aa14.33□□□□□ -0.12
RORA-212ENST00000560004 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 SLX4Q8IY92 1834 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 LMBR1LQ6UX01 489 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 CCDC85AQ96PX6 553 aaPredicted RBP14.32□□□□□ -0.12
RORA-212ENST00000560004 GREM2Q9H772 168 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 SRCAPQ6ZRS2 3230 aa14.32□□□□□ -0.12
RORA-212ENST00000560004 SRGNP10124 158 aa14.31□□□□□ -0.12
RORA-212ENST00000560004 PDE6BP35913 854 aa14.31□□□□□ -0.12
RORA-212ENST00000560004 RFX5P48382 616 aaPredicted RBP14.31□□□□□ -0.12
RORA-212ENST00000560004 CHMP4BQ9H444 224 aaKnown RBP14.31□□□□□ -0.12
RORA-212ENST00000560004 ARFGEF1Q9Y6D6 1849 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 HSP90B1P14625 803 aaKnown RBP14.3□□□□□ -0.12
RORA-212ENST00000560004 KCNA3P22001 575 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 CHRNA5P30532 468 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
RORA-212ENST00000560004 POLA2Q14181 598 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 SLC51AQ86UW1 340 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 NLGN2Q8NFZ4 835 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 SEC31BQ9NQW1 1179 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 CD2APQ9Y5K6 639 aa14.3□□□□□ -0.12
RORA-212ENST00000560004 ITGA6P23229 1130 aa14.29□□□□□ -0.12
RORA-212ENST00000560004 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
RORA-212ENST00000560004 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
RORA-212ENST00000560004 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
RORA-212ENST00000560004 NPR1P16066 1061 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 DPEP1P16444 411 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 TGFB2P61812 414 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 AAMPQ13685 434 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
RORA-212ENST00000560004 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
RORA-212ENST00000560004 DUOX1Q9NRD9 1551 aa14.27□□□□□ -0.12
RORA-212ENST00000560004 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 NEFLP07196 543 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
RORA-212ENST00000560004 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.13
RORA-212ENST00000560004 MASTLQ96GX5 879 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.13
RORA-212ENST00000560004 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
RORA-212ENST00000560004 H0YIN7 160 aa14.26□□□□□ -0.13
RORA-212ENST00000560004 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 GRAPQ13588 217 aa14.26□□□□□ -0.13
RORA-212ENST00000560004 RPAP2Q8IXW5 612 aaPredicted RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 ZNF594Q96JF6 807 aaPredicted RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
RORA-212ENST00000560004 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
RORA-212ENST00000560004 ARAP2Q8WZ64 1704 aa14.26□□□□□ -0.13
RORA-212ENST00000560004 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
RORA-212ENST00000560004 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
RORA-212ENST00000560004 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
RORA-212ENST00000560004 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
RORA-212ENST00000560004 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
RORA-212ENST00000560004 PRPF40BQ6NWY9 871 aaKnown RBP14.24□□□□□ -0.13
RORA-212ENST00000560004 CDC5LQ99459 802 aaKnown RBP14.24□□□□□ -0.13
RORA-212ENST00000560004 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
RORA-212ENST00000560004 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
RORA-212ENST00000560004 FER1L6Q2WGJ9 1857 aa14.24□□□□□ -0.13
RORA-212ENST00000560004 PPEF1O14829 653 aaPredicted RBP14.23□□□□□ -0.13
RORA-212ENST00000560004 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
RORA-212ENST00000560004 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.13
RORA-212ENST00000560004 IGHDP01880 384 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
RORA-212ENST00000560004 LRRC24Q50LG9 513 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 ANKRD18AQ8IVF6 992 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 C7orf43Q8WVR3 580 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 CNKSR1Q969H4 720 aa14.22□□□□□ -0.13
RORA-212ENST00000560004 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
RORA-212ENST00000560004 CIAO1O76071 339 aa14.21□□□□□ -0.13
RORA-212ENST00000560004 ALDH1B1P30837 517 aa14.21□□□□□ -0.13
RORA-212ENST00000560004 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.13
RORA-212ENST00000560004 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
RORA-212ENST00000560004 OLFM4Q6UX06 510 aa14.21□□□□□ -0.13
RORA-212ENST00000560004 SIL1Q9H173 461 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms