RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
IDH3A-217ENST00000559889 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
IDH3A-217ENST00000559889 JDP2Q8WYK2 163 aa11.66□□□□□ -0.54
IDH3A-217ENST00000559889 COL4A1P02462 1669 aa11.65□□□□□ -0.54
IDH3A-217ENST00000559889 GPC2Q8N158 579 aa11.65□□□□□ -0.54
IDH3A-217ENST00000559889 PPP4R2Q9NY27 417 aa11.65□□□□□ -0.54
IDH3A-217ENST00000559889 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
IDH3A-217ENST00000559889 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.54
IDH3A-217ENST00000559889 MYD88Q99836 296 aa11.65□□□□□ -0.54
IDH3A-217ENST00000559889 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
IDH3A-217ENST00000559889 AOC3Q16853 763 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
IDH3A-217ENST00000559889 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
IDH3A-217ENST00000559889 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
IDH3A-217ENST00000559889 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 SCN4AP35499 1836 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 TAF1P21675 1872 aa11.64□□□□□ -0.55
IDH3A-217ENST00000559889 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 DPP8Q6V1X1 898 aaPredicted RBP11.63□□□□□ -0.55
IDH3A-217ENST00000559889 WDR63Q8IWG1 891 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 MPNDQ8N594 471 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 KLRG1Q96E93 195 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
IDH3A-217ENST00000559889 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
IDH3A-217ENST00000559889 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 EPHX2P34913 555 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
IDH3A-217ENST00000559889 G2E3Q7L622 706 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
IDH3A-217ENST00000559889 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
IDH3A-217ENST00000559889 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 DDX58O95786 925 aaKnown RBP11.62□□□□□ -0.55
IDH3A-217ENST00000559889 SCNN1DP51172 638 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 NIM1KQ8IY84 436 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
IDH3A-217ENST00000559889 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
IDH3A-217ENST00000559889 ADAMTSL1Q8N6G6 1762 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 KIAA2012Q0VF49 1180 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
IDH3A-217ENST00000559889 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
IDH3A-217ENST00000559889 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 VAMP4O75379 141 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 CXCL9Q07325 125 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
IDH3A-217ENST00000559889 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
IDH3A-217ENST00000559889 EPS15P42566 896 aa11.6□□□□□ -0.55
IDH3A-217ENST00000559889 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
IDH3A-217ENST00000559889 PNMA8AQ86V59 439 aaPredicted RBP11.6□□□□□ -0.55
IDH3A-217ENST00000559889 PDE8AO60658 829 aa11.6□□□□□ -0.55
IDH3A-217ENST00000559889 GPSM2P81274 684 aa11.6□□□□□ -0.55
IDH3A-217ENST00000559889 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
IDH3A-217ENST00000559889 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
IDH3A-217ENST00000559889 POLLQ9UGP5 575 aa11.6□□□□□ -0.55
IDH3A-217ENST00000559889 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
IDH3A-217ENST00000559889 YDJCA8MPS7 323 aa11.59□□□□□ -0.55
IDH3A-217ENST00000559889 FLIIQ13045 1269 aa11.59□□□□□ -0.55
IDH3A-217ENST00000559889 CDHR2Q9BYE9 1310 aa11.59□□□□□ -0.55
IDH3A-217ENST00000559889 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
IDH3A-217ENST00000559889 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
IDH3A-217ENST00000559889 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
IDH3A-217ENST00000559889 PIAS4Q8N2W9 510 aaPredicted RBP11.59□□□□□ -0.55
IDH3A-217ENST00000559889 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
IDH3A-217ENST00000559889 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
IDH3A-217ENST00000559889 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
IDH3A-217ENST00000559889 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 GPRC5DQ9NZD1 345 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
IDH3A-217ENST00000559889 H7C1W4 665 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 RAD17O75943 681 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 CNTROBQ8N137 903 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
IDH3A-217ENST00000559889 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
IDH3A-217ENST00000559889 CTSWP56202 376 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms