RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
USP3-213ENST00000559711 KRT27Q7Z3Y8 459 aa15.46■□□□□ 0.07
USP3-213ENST00000559711 EVI5LQ96CN4 794 aa15.46■□□□□ 0.07
USP3-213ENST00000559711 PUS3Q9BZE2 481 aaKnown RBP15.46■□□□□ 0.07
USP3-213ENST00000559711 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP3-213ENST00000559711 BTAF1O14981 1849 aa15.45■□□□□ 0.06
USP3-213ENST00000559711 NUP98P52948 1817 aa15.45■□□□□ 0.06
USP3-213ENST00000559711 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
USP3-213ENST00000559711 ZNF772Q68DY9 489 aaPredicted RBP15.45■□□□□ 0.06
USP3-213ENST00000559711 GREM2Q9H772 168 aa15.45■□□□□ 0.06
USP3-213ENST00000559711 ANKRD36CQ5JPF3 1778 aa15.45■□□□□ 0.06
USP3-213ENST00000559711 NTSR2O95665 410 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
USP3-213ENST00000559711 ITGA6P23229 1130 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 TBC1D2Q9BYX2 928 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 ANKRD18BA2A2Z9 1011 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
USP3-213ENST00000559711 SNX21Q969T3 373 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
USP3-213ENST00000559711 GNPATO15228 680 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 SGSM2O43147 1006 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
USP3-213ENST00000559711 BOLA2Q9H3K6 86 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 BCL2L12Q9HB09 334 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 RTCBQ9Y3I0 505 aaKnown RBP15.43■□□□□ 0.06
USP3-213ENST00000559711 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
USP3-213ENST00000559711 HCLS1P14317 486 aaPredicted RBP15.42■□□□□ 0.06
USP3-213ENST00000559711 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
USP3-213ENST00000559711 TIMM10P62072 90 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 LDHAL6AQ6ZMR3 332 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 A0A1B0GUL7 405 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 HIP1O00291 1037 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 HAUS7Q99871 368 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 IL25Q9H293 177 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 LRRC4BQ9NT99 713 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 SBF2Q86WG5 1849 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 ZNF609O15014 1411 aa15.41■□□□□ 0.06
USP3-213ENST00000559711 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 FAM177BA6PVY3 158 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 LY75O60449 1722 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 RABEP1Q15276 862 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 SLC27A3Q5K4L6 730 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 USPL1Q5W0Q7 1092 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 RUFY2Q8WXA3 655 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
USP3-213ENST00000559711 NEUROD6Q96NK8 337 aa15.4■□□□□ 0.06
USP3-213ENST00000559711 ZPR1O75312 459 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 CCDC152Q4G0S7 254 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP3-213ENST00000559711 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 ANO2Q9NQ90 1003 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
USP3-213ENST00000559711 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
USP3-213ENST00000559711 TICAM2Q86XR7 235 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
USP3-213ENST00000559711 TRIM37O94972 964 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 ADRA2BP18089 450 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 ANAPC15P60006 121 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 TRAPPC3LQ5T215 181 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 HSCBQ8IWL3 235 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 VGLL2Q8N8G2 317 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
USP3-213ENST00000559711 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
USP3-213ENST00000559711 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
USP3-213ENST00000559711 MCCP23508 829 aa15.37■□□□□ 0.05
USP3-213ENST00000559711 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
USP3-213ENST00000559711 SF3B3Q15393 1217 aaKnown RBP15.37■□□□□ 0.05
USP3-213ENST00000559711 SETDB2Q96T68 719 aa15.37■□□□□ 0.05
USP3-213ENST00000559711 FSD1Q9BTV5 496 aa15.37■□□□□ 0.05
USP3-213ENST00000559711 RFX7Q2KHR2 1363 aa15.37■□□□□ 0.05
USP3-213ENST00000559711 ERFEQ4G0M1 354 aa15.36■□□□□ 0.05
USP3-213ENST00000559711 XAGE2Q96GT9 111 aa15.36■□□□□ 0.05
USP3-213ENST00000559711 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
USP3-213ENST00000559711 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
USP3-213ENST00000559711 RAD50Q92878 1312 aa15.36■□□□□ 0.05
USP3-213ENST00000559711 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 PDE8BO95263 885 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 HSPA4P34932 840 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 RFC4P35249 363 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 CCDC158Q5M9N0 1113 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
USP3-213ENST00000559711 SEC31BQ9NQW1 1179 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 ADORA1P30542 326 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
USP3-213ENST00000559711 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
USP3-213ENST00000559711 DNAJC2Q99543 621 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms