RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FOXO4P98177 505 aa14.53□□□□□ -0.08
SNX1-204ENST00000559061 NLRP3Q96P20 1036 aa14.53□□□□□ -0.08
SNX1-204ENST00000559061 PLA2G12BQ9BX93 195 aa14.53□□□□□ -0.08
SNX1-204ENST00000559061 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
SNX1-204ENST00000559061 COL4A5P29400 1685 aa14.52□□□□□ -0.08
SNX1-204ENST00000559061 NFKBIEO00221 500 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 GRM8O00222 908 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 ATF7IPQ6VMQ6 1270 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 CRAMP1Q96RY5 1269 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 USP44Q9H0E7 712 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
SNX1-204ENST00000559061 RTL9Q8NET4 1388 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 C21orf2O43822 256 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 PDE8AO60658 829 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 CTSWP56202 376 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 INTS3Q68E01 1043 aaKnown RBP14.51□□□□□ -0.09
SNX1-204ENST00000559061 TTLL11Q8NHH1 800 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 CELF1Q92879 486 aaKnown RBP14.51□□□□□ -0.09
SNX1-204ENST00000559061 CNKSR1Q969H4 720 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 SUCLG2Q96I99 432 aa14.51□□□□□ -0.09
SNX1-204ENST00000559061 API5Q9BZZ5 524 aaKnown RBP14.51□□□□□ -0.09
SNX1-204ENST00000559061 TIAM2Q8IVF5 1701 aa14.5□□□□□ -0.09
SNX1-204ENST00000559061 CSF1RP07333 972 aa14.5□□□□□ -0.09
SNX1-204ENST00000559061 RASSF7Q02833 373 aa14.5□□□□□ -0.09
SNX1-204ENST00000559061 RPGRQ92834 1020 aaKnown RBP14.5□□□□□ -0.09
SNX1-204ENST00000559061 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
SNX1-204ENST00000559061 CCDC85AQ96PX6 553 aaPredicted RBP14.5□□□□□ -0.09
SNX1-204ENST00000559061 GREM2Q9H772 168 aa14.5□□□□□ -0.09
SNX1-204ENST00000559061 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
SNX1-204ENST00000559061 RCAN3Q9UKA8 241 aa14.5□□□□□ -0.09
SNX1-204ENST00000559061 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
SNX1-204ENST00000559061 GRAPQ13588 217 aa14.49□□□□□ -0.09
SNX1-204ENST00000559061 FAM161AQ3B820 660 aa14.49□□□□□ -0.09
SNX1-204ENST00000559061 ANKRD44Q8N8A2 993 aa14.49□□□□□ -0.09
SNX1-204ENST00000559061 GRAPLQ8TC17 118 aaPredicted RBP14.49□□□□□ -0.09
SNX1-204ENST00000559061 CLUAP1Q96AJ1 413 aa14.49□□□□□ -0.09
SNX1-204ENST00000559061 RBM17Q96I25 401 aaKnown RBP14.49□□□□□ -0.09
SNX1-204ENST00000559061 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
SNX1-204ENST00000559061 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
SNX1-204ENST00000559061 MEIS3Q99687 375 aa14.48□□□□□ -0.09
SNX1-204ENST00000559061 PPEF1O14829 653 aaPredicted RBP14.47□□□□□ -0.09
SNX1-204ENST00000559061 PLIN1O60240 522 aa14.47□□□□□ -0.09
SNX1-204ENST00000559061 GRIN3BO60391 1043 aa14.47□□□□□ -0.09
SNX1-204ENST00000559061 CCT4P50991 539 aaKnown RBP14.47□□□□□ -0.09
SNX1-204ENST00000559061 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
SNX1-204ENST00000559061 ALDH1B1P30837 517 aa14.46□□□□□ -0.09
SNX1-204ENST00000559061 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
SNX1-204ENST00000559061 ARHGAP27Q6ZUM4 889 aa14.46□□□□□ -0.09
SNX1-204ENST00000559061 PANK1Q8TE04 598 aa14.46□□□□□ -0.09
SNX1-204ENST00000559061 ATP6V0A2Q9Y487 856 aa14.46□□□□□ -0.09
SNX1-204ENST00000559061 LTBP3Q9NS15 1303 aa14.45□□□□□ -0.1
SNX1-204ENST00000559061 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
SNX1-204ENST00000559061 CCDC152Q4G0S7 254 aa14.45□□□□□ -0.1
SNX1-204ENST00000559061 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
SNX1-204ENST00000559061 BICC1Q9H694 974 aaKnown RBP14.45□□□□□ -0.1
SNX1-204ENST00000559061 C9orf78Q9NZ63 289 aaPredicted RBP14.45□□□□□ -0.1
SNX1-204ENST00000559061 ZNF646O15015 1829 aaPredicted RBP14.44□□□□□ -0.1
SNX1-204ENST00000559061 WTIPA6NIX2 430 aaPredicted RBP14.44□□□□□ -0.1
SNX1-204ENST00000559061 CCDC93Q567U6 631 aa14.44□□□□□ -0.1
SNX1-204ENST00000559061 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
SNX1-204ENST00000559061 BBOX1O75936 387 aa14.43□□□□□ -0.1
SNX1-204ENST00000559061 ITGA6P23229 1130 aa14.43□□□□□ -0.1
SNX1-204ENST00000559061 RPS8P62241 208 aaKnown RBP14.43□□□□□ -0.1
SNX1-204ENST00000559061 SP8Q8IXZ3 490 aa14.43□□□□□ -0.1
SNX1-204ENST00000559061 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
SNX1-204ENST00000559061 RFX5P48382 616 aaPredicted RBP14.42□□□□□ -0.1
SNX1-204ENST00000559061 GPSM2P81274 684 aa14.42□□□□□ -0.1
SNX1-204ENST00000559061 ZNF594Q96JF6 807 aaPredicted RBP14.42□□□□□ -0.1
SNX1-204ENST00000559061 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
SNX1-204ENST00000559061 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
SNX1-204ENST00000559061 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNX1-204ENST00000559061 C9orf131Q5VYM1 1079 aa14.41□□□□□ -0.1
SNX1-204ENST00000559061 RTFDC1Q9BY42 306 aaPredicted RBP14.41□□□□□ -0.1
SNX1-204ENST00000559061 TAOK3Q9H2K8 898 aa14.41□□□□□ -0.1
SNX1-204ENST00000559061 ZNF277Q9NRM2 450 aaPredicted RBP14.41□□□□□ -0.1
SNX1-204ENST00000559061 ZBTB7BO15156 539 aaPredicted RBP14.4□□□□□ -0.1
SNX1-204ENST00000559061 SOGA3Q5TF21 947 aa14.4□□□□□ -0.1
SNX1-204ENST00000559061 KLHDC4Q8TBB5 520 aa14.4□□□□□ -0.1
SNX1-204ENST00000559061 GPR101Q96P66 508 aaPredicted RBP14.4□□□□□ -0.1
SNX1-204ENST00000559061 PSMD1Q99460 953 aa14.4□□□□□ -0.1
SNX1-204ENST00000559061 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
SNX1-204ENST00000559061 UBTFL1P0CB47 393 aaPredicted RBP14.39□□□□□ -0.11
SNX1-204ENST00000559061 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 ANKRD18AQ8IVF6 992 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 RTKN2Q8IZC4 609 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 PUS3Q9BZE2 481 aaKnown RBP14.39□□□□□ -0.11
SNX1-204ENST00000559061 BSDC1Q9NW68 430 aaPredicted RBP14.39□□□□□ -0.11
SNX1-204ENST00000559061 POLLQ9UGP5 575 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 IRS2Q9Y4H2 1338 aa14.39□□□□□ -0.11
SNX1-204ENST00000559061 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 LMNB1P20700 586 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 RRP1P56182 461 aaKnown RBP14.38□□□□□ -0.11
SNX1-204ENST00000559061 TMC4Q7Z404 712 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
SNX1-204ENST00000559061 CDC5LQ99459 802 aaKnown RBP14.38□□□□□ -0.11
SNX1-204ENST00000559061 C1orf115Q9H7X2 142 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms