RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
PBX1-213ENST00000558796 KDM2BQ8NHM5 1336 aa14.05□□□□□ -0.16
PBX1-213ENST00000558796 SCN4AP35499 1836 aa14.04□□□□□ -0.16
PBX1-213ENST00000558796 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
PBX1-213ENST00000558796 CCDC85AQ96PX6 553 aaPredicted RBP14.04□□□□□ -0.16
PBX1-213ENST00000558796 ATP6V0A2Q9Y487 856 aa14.04□□□□□ -0.16
PBX1-213ENST00000558796 KIF3CO14782 793 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
PBX1-213ENST00000558796 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 CELF1Q92879 486 aaKnown RBP14.03□□□□□ -0.16
PBX1-213ENST00000558796 PSMD1Q99460 953 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 CDHR2Q9BYE9 1310 aa14.03□□□□□ -0.16
PBX1-213ENST00000558796 GLTPD2A6NH11 291 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 PDE8AO60658 829 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 BBOX1O75936 387 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
PBX1-213ENST00000558796 C1QTNF8P60827 252 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.17
PBX1-213ENST00000558796 GCKRQ14397 625 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 LINS1Q8NG48 757 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 TMX4Q9H1E5 349 aaPredicted RBP14.02□□□□□ -0.17
PBX1-213ENST00000558796 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.17
PBX1-213ENST00000558796 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
PBX1-213ENST00000558796 CTSWP56202 376 aa14.01□□□□□ -0.17
PBX1-213ENST00000558796 CCDC152Q4G0S7 254 aa14.01□□□□□ -0.17
PBX1-213ENST00000558796 TRMT2AQ8IZ69 625 aaKnown RBP14.01□□□□□ -0.17
PBX1-213ENST00000558796 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
PBX1-213ENST00000558796 SSH1Q8WYL5 1049 aa14.01□□□□□ -0.17
PBX1-213ENST00000558796 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
PBX1-213ENST00000558796 PSME4Q14997 1843 aa14□□□□□ -0.17
PBX1-213ENST00000558796 H7C1W4 665 aa14□□□□□ -0.17
PBX1-213ENST00000558796 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
PBX1-213ENST00000558796 BEND3Q5T5X7 828 aa14□□□□□ -0.17
PBX1-213ENST00000558796 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
PBX1-213ENST00000558796 DPP8Q6V1X1 898 aaPredicted RBP14□□□□□ -0.17
PBX1-213ENST00000558796 SP8Q8IXZ3 490 aa14□□□□□ -0.17
PBX1-213ENST00000558796 SCN9AQ15858 1988 aa14□□□□□ -0.17
PBX1-213ENST00000558796 CEP350Q5VT06 3117 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 PPIP5K2O43314 1243 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 AOC3Q16853 763 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 TMC4Q7Z404 712 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 LARGE2Q8N3Y3 721 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 MPNDQ8N594 471 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
PBX1-213ENST00000558796 DDNO94850 711 aaPredicted RBP13.98□□□□□ -0.17
PBX1-213ENST00000558796 CASP7P55210 303 aa13.98□□□□□ -0.17
PBX1-213ENST00000558796 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
PBX1-213ENST00000558796 DPY19L2Q6NUT2 758 aa13.98□□□□□ -0.17
PBX1-213ENST00000558796 GREM2Q9H772 168 aa13.98□□□□□ -0.17
PBX1-213ENST00000558796 PTPRCP08575 1304 aa13.97□□□□□ -0.17
PBX1-213ENST00000558796 GPSM2P81274 684 aa13.97□□□□□ -0.17
PBX1-213ENST00000558796 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
PBX1-213ENST00000558796 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
PBX1-213ENST00000558796 TTLL11Q8NHH1 800 aa13.97□□□□□ -0.17
PBX1-213ENST00000558796 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
PBX1-213ENST00000558796 RTFDC1Q9BY42 306 aaPredicted RBP13.97□□□□□ -0.17
PBX1-213ENST00000558796 FZD9O00144 591 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 ANKRD18AQ8IVF6 992 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 SUPT20HQ8NEM7 779 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 PLA2G12BQ9BX93 195 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
PBX1-213ENST00000558796 NSFL1CQ9UNZ2 370 aaKnown RBP13.96□□□□□ -0.17
PBX1-213ENST00000558796 RTL9Q8NET4 1388 aa13.96□□□□□ -0.18
PBX1-213ENST00000558796 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
PBX1-213ENST00000558796 POTECB2RU33 542 aa13.95□□□□□ -0.18
PBX1-213ENST00000558796 GRM8O00222 908 aa13.95□□□□□ -0.18
PBX1-213ENST00000558796 ALDH1L1O75891 902 aa13.95□□□□□ -0.18
PBX1-213ENST00000558796 TOMM70O94826 608 aa13.95□□□□□ -0.18
PBX1-213ENST00000558796 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
PBX1-213ENST00000558796 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
PBX1-213ENST00000558796 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
PBX1-213ENST00000558796 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
PBX1-213ENST00000558796 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
PBX1-213ENST00000558796 C6orf229H3BNL8 230 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 EIF6P56537 245 aaKnown RBP13.94□□□□□ -0.18
PBX1-213ENST00000558796 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 C9orf78Q9NZ63 289 aaPredicted RBP13.94□□□□□ -0.18
PBX1-213ENST00000558796 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 POLLQ9UGP5 575 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 CHMP3Q9Y3E7 222 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 GJA3Q9Y6H8 435 aa13.94□□□□□ -0.18
PBX1-213ENST00000558796 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
PBX1-213ENST00000558796 UFL1O94874 794 aa13.93□□□□□ -0.18
PBX1-213ENST00000558796 ITGA6P23229 1130 aa13.93□□□□□ -0.18
PBX1-213ENST00000558796 FOXO4P98177 505 aa13.93□□□□□ -0.18
PBX1-213ENST00000558796 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
PBX1-213ENST00000558796 L3MBTL3Q96JM7 780 aaPredicted RBP13.93□□□□□ -0.18
PBX1-213ENST00000558796 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 RARSP54136 660 aaKnown RBP13.92□□□□□ -0.18
PBX1-213ENST00000558796 WASHC4Q2M389 1173 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 GPC2Q8N158 579 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 TBC1D16Q8TBP0 767 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
PBX1-213ENST00000558796 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
PBX1-213ENST00000558796 XDHP47989 1333 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms