RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 ACEP12821 1306 aa11.35□□□□□ -0.59
SCG3-203ENST00000558709 MAGEB6P1A0A0J9YX57 407 aa11.34□□□□□ -0.59
SCG3-203ENST00000558709 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
SCG3-203ENST00000558709 AXIN1O15169 862 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 DDB1Q16531 1140 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 KLF16Q9BXK1 252 aaPredicted RBP11.33□□□□□ -0.6
SCG3-203ENST00000558709 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
SCG3-203ENST00000558709 LTN1O94822 1766 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 PTK2Q05397 1052 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 NNTQ13423 1086 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 BCL9O00512 1426 aa11.32□□□□□ -0.6
SCG3-203ENST00000558709 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
SCG3-203ENST00000558709 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
SCG3-203ENST00000558709 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
SCG3-203ENST00000558709 GCP02774 474 aa11.31□□□□□ -0.6
SCG3-203ENST00000558709 NR3C2P08235 984 aa11.31□□□□□ -0.6
SCG3-203ENST00000558709 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
SCG3-203ENST00000558709 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 MAP3K5Q99683 1374 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 NR5A1Q13285 461 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
SCG3-203ENST00000558709 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
SCG3-203ENST00000558709 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
SCG3-203ENST00000558709 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
SCG3-203ENST00000558709 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 ARXQ96QS3 562 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 ABCC6O95255 1503 aa11.28□□□□□ -0.6
SCG3-203ENST00000558709 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.6
SCG3-203ENST00000558709 TNS2Q63HR2 1409 aa11.27□□□□□ -0.6
SCG3-203ENST00000558709 LY75O60449 1722 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 POTECB2RU33 542 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 TIMP2P16035 220 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 GPR162Q16538 588 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.61
SCG3-203ENST00000558709 FBXO45P0C2W1 286 aa11.26□□□□□ -0.61
SCG3-203ENST00000558709 FSHRP23945 695 aa11.26□□□□□ -0.61
SCG3-203ENST00000558709 VASH1Q7L8A9 365 aaPredicted RBP11.26□□□□□ -0.61
SCG3-203ENST00000558709 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SCG3-203ENST00000558709 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
SCG3-203ENST00000558709 USP6P35125 1406 aa11.26□□□□□ -0.61
SCG3-203ENST00000558709 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
SCG3-203ENST00000558709 APBB1O00213 710 aa11.25□□□□□ -0.61
SCG3-203ENST00000558709 MCM6Q14566 821 aa11.25□□□□□ -0.61
SCG3-203ENST00000558709 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
SCG3-203ENST00000558709 ATP13A2Q9NQ11 1180 aa11.25□□□□□ -0.61
SCG3-203ENST00000558709 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
SCG3-203ENST00000558709 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
SCG3-203ENST00000558709 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
SCG3-203ENST00000558709 NFAT5O94916 1531 aa11.24□□□□□ -0.61
SCG3-203ENST00000558709 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
SCG3-203ENST00000558709 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
SCG3-203ENST00000558709 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
SCG3-203ENST00000558709 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
SCG3-203ENST00000558709 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
SCG3-203ENST00000558709 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
SCG3-203ENST00000558709 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
SCG3-203ENST00000558709 TRIM46Q7Z4K8 759 aa11.22□□□□□ -0.61
SCG3-203ENST00000558709 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
SCG3-203ENST00000558709 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
SCG3-203ENST00000558709 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
SCG3-203ENST00000558709 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
SCG3-203ENST00000558709 ESPNB1AK53 854 aa11.21□□□□□ -0.61
SCG3-203ENST00000558709 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
SCG3-203ENST00000558709 NR1H3Q13133 447 aa11.21□□□□□ -0.61
SCG3-203ENST00000558709 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
SCG3-203ENST00000558709 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.61
SCG3-203ENST00000558709 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
SCG3-203ENST00000558709 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 CCDC7Q96M83 1385 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 EXOC5O00471 708 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 IRF5Q13568 498 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
SCG3-203ENST00000558709 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 C5P01031 1676 aa11.2□□□□□ -0.62
SCG3-203ENST00000558709 ZIC2O95409 532 aaPredicted RBP11.19□□□□□ -0.62
SCG3-203ENST00000558709 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
SCG3-203ENST00000558709 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
SCG3-203ENST00000558709 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
SCG3-203ENST00000558709 BMP1P13497 986 aa11.18□□□□□ -0.62
SCG3-203ENST00000558709 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCG3-203ENST00000558709 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
SCG3-203ENST00000558709 ARHGEF25Q86VW2 580 aa11.18□□□□□ -0.62
SCG3-203ENST00000558709 POLD1P28340 1107 aa11.17□□□□□ -0.62
SCG3-203ENST00000558709 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
SCG3-203ENST00000558709 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms