RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 COL4A1P02462 1669 aa13.08□□□□□ -0.31
TPM1-212ENST00000558347 FZD9O00144 591 aa13.08□□□□□ -0.32
TPM1-212ENST00000558347 FSTL1Q12841 308 aa13.08□□□□□ -0.32
TPM1-212ENST00000558347 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
TPM1-212ENST00000558347 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
TPM1-212ENST00000558347 GRAPQ13588 217 aa13.07□□□□□ -0.32
TPM1-212ENST00000558347 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
TPM1-212ENST00000558347 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
TPM1-212ENST00000558347 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
TPM1-212ENST00000558347 G2E3Q7L622 706 aa13.07□□□□□ -0.32
TPM1-212ENST00000558347 GRAPLQ8TC17 118 aaPredicted RBP13.07□□□□□ -0.32
TPM1-212ENST00000558347 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
TPM1-212ENST00000558347 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
TPM1-212ENST00000558347 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
TPM1-212ENST00000558347 BBOX1O75936 387 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
TPM1-212ENST00000558347 APLP1P51693 650 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
TPM1-212ENST00000558347 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
TPM1-212ENST00000558347 SMC1BQ8NDV3 1235 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
TPM1-212ENST00000558347 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
TPM1-212ENST00000558347 SCN4AP35499 1836 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
TPM1-212ENST00000558347 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
TPM1-212ENST00000558347 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 SP8Q8IXZ3 490 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
TPM1-212ENST00000558347 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
TPM1-212ENST00000558347 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
TPM1-212ENST00000558347 VAMP4O75379 141 aa13.04□□□□□ -0.32
TPM1-212ENST00000558347 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
TPM1-212ENST00000558347 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
TPM1-212ENST00000558347 HTRA3P83110 453 aa13.04□□□□□ -0.32
TPM1-212ENST00000558347 AOC3Q16853 763 aa13.04□□□□□ -0.32
TPM1-212ENST00000558347 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
TPM1-212ENST00000558347 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
TPM1-212ENST00000558347 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
TPM1-212ENST00000558347 DUOX1Q9NRD9 1551 aa13.04□□□□□ -0.32
TPM1-212ENST00000558347 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
TPM1-212ENST00000558347 MPNDQ8N594 471 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 FLIIQ13045 1269 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
TPM1-212ENST00000558347 GPC2Q8N158 579 aa13.03□□□□□ -0.32
TPM1-212ENST00000558347 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
TPM1-212ENST00000558347 CACNA1FO60840 1977 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
TPM1-212ENST00000558347 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 DNAJC5GQ8N7S2 189 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 SUPT20HQ8NEM7 779 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 SEC31BQ9NQW1 1179 aa13.02□□□□□ -0.33
TPM1-212ENST00000558347 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 PDE8AO60658 829 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 MS4A1P11836 297 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
TPM1-212ENST00000558347 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
TPM1-212ENST00000558347 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
TPM1-212ENST00000558347 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
TPM1-212ENST00000558347 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
TPM1-212ENST00000558347 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
TPM1-212ENST00000558347 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
TPM1-212ENST00000558347 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
TPM1-212ENST00000558347 MYH3P11055 1940 aa13□□□□□ -0.33
TPM1-212ENST00000558347 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
TPM1-212ENST00000558347 EPHX2P34913 555 aa12.99□□□□□ -0.33
TPM1-212ENST00000558347 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
TPM1-212ENST00000558347 GPSM2P81274 684 aa12.99□□□□□ -0.33
TPM1-212ENST00000558347 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
TPM1-212ENST00000558347 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
TPM1-212ENST00000558347 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
TPM1-212ENST00000558347 PCNTO95613 3336 aa12.99□□□□□ -0.33
TPM1-212ENST00000558347 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
TPM1-212ENST00000558347 SCNN1DP51172 638 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 CXCL9Q07325 125 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 ZNRF3Q9ULT6 936 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 H7C1W4 665 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 EPS15P42566 896 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 CTSWP56202 376 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 GCKRQ14397 625 aa12.98□□□□□ -0.33
TPM1-212ENST00000558347 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
TPM1-212ENST00000558347 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms