RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 EIF2S2P20042 333 aaKnown RBP9.31□□□□□ -0.92
SPG11-204ENST00000557866 FUT2Q10981 343 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 FLIIQ13045 1269 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 MORN1Q5T089 497 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 SIRT2Q8IXJ6 389 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 STK31Q9BXU1 1019 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 MRC1P22897 1456 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 GFRA3O60609 400 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 ADAMTS2O95450 1211 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 S1PR4O95977 384 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 ANXA1P04083 346 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PROSER3Q2NL68 480 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 SPSB2Q99619 263 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
SPG11-204ENST00000557866 CHPF2Q9P2E5 772 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 USP35Q9P2H5 1018 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PCDH11XQ9BZA7 1347 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PCDH11YQ9BZA8 1340 aa9.3□□□□□ -0.92
SPG11-204ENST00000557866 PKD1L3Q7Z443 1732 aa9.29□□□□□ -0.92
SPG11-204ENST00000557866 CABP4P57796 275 aa9.29□□□□□ -0.92
SPG11-204ENST00000557866 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
SPG11-204ENST00000557866 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
SPG11-204ENST00000557866 MEIS3Q99687 375 aa9.29□□□□□ -0.92
SPG11-204ENST00000557866 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
SPG11-204ENST00000557866 NUTM2BA6NNL0 878 aaPredicted RBP9.28□□□□□ -0.92
SPG11-204ENST00000557866 NUTM2EB1AL46 878 aaPredicted RBP9.28□□□□□ -0.92
SPG11-204ENST00000557866 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 SLC19A1P41440 591 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 RGS3P49796 1198 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 FKBP5Q13451 457 aaPredicted RBP9.28□□□□□ -0.92
SPG11-204ENST00000557866 SLC4A10Q6U841 1118 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 Q6ZNB5 142 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 NUTM2AQ8IVF1 878 aaPredicted RBP9.28□□□□□ -0.92
SPG11-204ENST00000557866 SMC5Q8IY18 1101 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
SPG11-204ENST00000557866 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
SPG11-204ENST00000557866 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.92
SPG11-204ENST00000557866 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.93
SPG11-204ENST00000557866 CD46P15529 392 aa9.27□□□□□ -0.93
SPG11-204ENST00000557866 CCT4P50991 539 aaKnown RBP9.27□□□□□ -0.93
SPG11-204ENST00000557866 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
SPG11-204ENST00000557866 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.93
SPG11-204ENST00000557866 PHLPP1O60346 1717 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 ATP10DQ9P241 1426 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
SPG11-204ENST00000557866 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
SPG11-204ENST00000557866 CHMP4AQ9BY43 222 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 DBF4Q9UBU7 674 aaPredicted RBP9.26□□□□□ -0.93
SPG11-204ENST00000557866 SLC27A5Q9Y2P5 690 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 SPATA31A1Q5TZJ5 1347 aa9.26□□□□□ -0.93
SPG11-204ENST00000557866 ADCY9O60503 1353 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
SPG11-204ENST00000557866 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
SPG11-204ENST00000557866 CLCN1P35523 988 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 CEP85Q6P2H3 762 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
SPG11-204ENST00000557866 SLIT2O94813 1529 aa9.25□□□□□ -0.93
SPG11-204ENST00000557866 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 PI4KAP2A4QPH2 592 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 NUCB1Q02818 461 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 C8orf34Q49A92 452 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 BARGINQ6ZT62 677 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 PI4KAP1Q8N8J0 262 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 PARP4Q9UKK3 1724 aaKnown RBP9.24□□□□□ -0.93
SPG11-204ENST00000557866 SPATA31A5Q5VU36 1347 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 SPATA31A7Q8IWB4 1347 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 JCADQ9P266 1359 aa9.24□□□□□ -0.93
SPG11-204ENST00000557866 TNS2Q63HR2 1409 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 PXDNLA1KZ92 1463 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 EXOC5O00471 708 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 KDM4AO75164 1064 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 RPAP2Q8IXW5 612 aaPredicted RBP9.23□□□□□ -0.93
SPG11-204ENST00000557866 PIGBQ92521 554 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 DCTPP1Q9H773 170 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 GLI3P10071 1580 aa9.23□□□□□ -0.93
SPG11-204ENST00000557866 SHANK3Q9BYB0 1731 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 ZMYND10O75800 440 aa9.22□□□□□ -0.93
SPG11-204ENST00000557866 GNAI2P04899 355 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms