RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
SRSF5-218ENST00000557435 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
SRSF5-218ENST00000557435 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
SRSF5-218ENST00000557435 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
SRSF5-218ENST00000557435 UTYO14607 1347 aa11.89□□□□□ -0.51
SRSF5-218ENST00000557435 KIF16BQ96L93 1317 aa11.89□□□□□ -0.51
SRSF5-218ENST00000557435 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
SRSF5-218ENST00000557435 BCAR3O75815 825 aa11.89□□□□□ -0.51
SRSF5-218ENST00000557435 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
SRSF5-218ENST00000557435 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
SRSF5-218ENST00000557435 GRM8O00222 908 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 C21orf2O43822 256 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 CSF1RP07333 972 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 SLC4A10Q6U841 1118 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
SRSF5-218ENST00000557435 SBF1O95248 1867 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 FER1L6Q2WGJ9 1857 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 MYH3P11055 1940 aa11.88□□□□□ -0.51
SRSF5-218ENST00000557435 CCT4P50991 539 aaKnown RBP11.87□□□□□ -0.51
SRSF5-218ENST00000557435 GRAPQ13588 217 aa11.87□□□□□ -0.51
SRSF5-218ENST00000557435 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
SRSF5-218ENST00000557435 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
SRSF5-218ENST00000557435 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
SRSF5-218ENST00000557435 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
SRSF5-218ENST00000557435 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
SRSF5-218ENST00000557435 TAF1P21675 1872 aa11.87□□□□□ -0.51
SRSF5-218ENST00000557435 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
SRSF5-218ENST00000557435 ABCC4O15439 1325 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 FOXO4P98177 505 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 CCDC152Q4G0S7 254 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 ATF7IPQ6VMQ6 1270 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 RTKN2Q8IZC4 609 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
SRSF5-218ENST00000557435 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
SRSF5-218ENST00000557435 NFKBIEO00221 500 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
SRSF5-218ENST00000557435 TRIM27P14373 513 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 CTSWP56202 376 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
SRSF5-218ENST00000557435 CCDC93Q567U6 631 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
SRSF5-218ENST00000557435 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
SRSF5-218ENST00000557435 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
SRSF5-218ENST00000557435 PSMD1Q99460 953 aa11.84□□□□□ -0.51
SRSF5-218ENST00000557435 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
SRSF5-218ENST00000557435 CCDC88AQ3V6T2 1871 aa11.84□□□□□ -0.51
SRSF5-218ENST00000557435 LMNB1P20700 586 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 PRELPP51888 382 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
SRSF5-218ENST00000557435 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 OLFM4Q6UX06 510 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
SRSF5-218ENST00000557435 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
SRSF5-218ENST00000557435 VPS33BQ9H267 617 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 GREM2Q9H772 168 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
SRSF5-218ENST00000557435 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
SRSF5-218ENST00000557435 DICER1Q9UPY3 1922 aaKnown RBP11.82□□□□□ -0.52
SRSF5-218ENST00000557435 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRSF5-218ENST00000557435 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
SRSF5-218ENST00000557435 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
SRSF5-218ENST00000557435 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
SRSF5-218ENST00000557435 YY1P25490 414 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 RASSF7Q02833 373 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
SRSF5-218ENST00000557435 BSDC1Q9NW68 430 aaPredicted RBP11.81□□□□□ -0.52
SRSF5-218ENST00000557435 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
SRSF5-218ENST00000557435 COL4A1P02462 1669 aa11.81□□□□□ -0.52
SRSF5-218ENST00000557435 LRRC37AA6NMS7 1700 aa11.8□□□□□ -0.52
SRSF5-218ENST00000557435 ITGA6P23229 1130 aa11.8□□□□□ -0.52
SRSF5-218ENST00000557435 MPNDQ8N594 471 aa11.8□□□□□ -0.52
SRSF5-218ENST00000557435 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
SRSF5-218ENST00000557435 TNNQ9UQP3 1299 aa11.8□□□□□ -0.52
SRSF5-218ENST00000557435 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 MS4A1P11836 297 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
SRSF5-218ENST00000557435 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 SLC51AQ86UW1 340 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
SRSF5-218ENST00000557435 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 SUPT20HQ8NEM7 779 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
SRSF5-218ENST00000557435 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
SRSF5-218ENST00000557435 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
SRSF5-218ENST00000557435 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 318 ms