RNA–Protein interactions for RNA: ENST00000556616.5

PRMT5-223, Transcript of protein arginine methyltransferase 5, human

TSL 4

Gene PRMT5, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT5-223	ENST00000556616	FKBPL	Q9UIM3	349 aa		9.44	□□□□□ -0.9
PRMT5-223	ENST00000556616	KIF16B	Q96L93	1317 aa		9.44	□□□□□ -0.9
PRMT5-223	ENST00000556616	COL22A1	Q8NFW1	1626 aa	Predicted RBP	9.44	□□□□□ -0.9
PRMT5-223	ENST00000556616	RGPD5	Q99666	1765 aa		9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	SOS1	Q07889	1333 aa	Predicted RBP	9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	GNAT3	A8MTJ3	354 aa		9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	F12	P00748	615 aa	Predicted RBP	9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	BLOC1S3	Q6QNY0	202 aa		9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	RNF19B	Q6ZMZ0	732 aa		9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	ZNF687	Q8N1G0	1237 aa		9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	GNE	Q9Y223	722 aa	Known RBP	9.43	□□□□□ -0.9
PRMT5-223	ENST00000556616	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	TK2	O00142	265 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	PIK3CD	O00329	1044 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	RLBP1	P12271	317 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	AMOT	Q4VCS5	1084 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	ZKSCAN2	Q63HK3	967 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	ATF7IP	Q6VMQ6	1270 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	MCM10	Q7L590	875 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	MRPL50	Q8N5N7	158 aa	Known RBP	9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	TSPYL6	Q8N831	410 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	C8orf58	Q8NAV2	365 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	IL17RE	Q8NFR9	667 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	PRR14	Q9BWN1	585 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	KDM3B	Q7LBC6	1761 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	PKD1L3	Q7Z443	1732 aa		9.42	□□□□□ -0.9
PRMT5-223	ENST00000556616	TRIM27	P14373	513 aa		9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	TWISTNB	Q3B726	338 aa	Predicted RBP	9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	SND1	Q7KZF4	910 aa	Known RBP eCLIP	9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	PANK1	Q8TE04	598 aa		9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	LRRC59	Q96AG4	307 aa	Known RBP	9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	LTV1	Q96GA3	475 aa	Predicted RBP	9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	LRCH3	Q96II8	777 aa		9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	SMC4	Q9NTJ3	1288 aa		9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	TNN	Q9UQP3	1299 aa		9.41	□□□□□ -0.9
PRMT5-223	ENST00000556616	RGS12	O14924	1447 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	SIPA1L3	O60292	1781 aa	Predicted RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	ROBO1	Q9Y6N7	1651 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	IPO8	O15397	1037 aa	Known RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	MVP	Q14764	893 aa	Known RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	PLEKHO1	Q53GL0	409 aa	Predicted RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	AKAP4	Q5JQC9	854 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	PLEKHM2	Q8IWE5	1019 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	DZIP1L	Q8IYY4	767 aa	Known RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	USHBP1	Q8N6Y0	703 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	RTF1	Q92541	710 aa	Known RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	THAP11	Q96EK4	314 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	BCL2L13	Q9BXK5	485 aa		9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.4	□□□□□ -0.9
PRMT5-223	ENST00000556616	COL5A2	P05997	1499 aa	Predicted RBP	9.4	□□□□□ -0.91
PRMT5-223	ENST00000556616	MRC1	P22897	1456 aa		9.4	□□□□□ -0.91
PRMT5-223	ENST00000556616	PARP4	Q9UKK3	1724 aa	Known RBP	9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	ABCC4	O15439	1325 aa		9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	ZC3H6	P61129	1189 aa	Known RBP	9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	SCUBE3	Q8IX30	993 aa		9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	FRAT1	Q92837	279 aa	Predicted RBP	9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	OTUD5	Q96G74	571 aa		9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	ZMIZ1	Q9ULJ6	1067 aa		9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	NOB1	Q9ULX3	412 aa	Known RBP	9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	LAS1L	Q9Y4W2	734 aa	Known RBP	9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	MEGF6	O75095	1541 aa		9.39	□□□□□ -0.91
PRMT5-223	ENST00000556616	HEG1	Q9ULI3	1381 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	USP17L3	A6NCW0	530 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	USP17L4	A6NCW7	530 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	SKI	P12755	728 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	JUND	P17535	347 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	RBM25	P49756	843 aa	Known RBP	9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	TAF7	Q15545	349 aa	Predicted RBP	9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	PTPRN	Q16849	979 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	TMEM164	Q5U3C3	297 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	USP17L2	Q6R6M4	530 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	USP17L1	Q7RTZ2	530 aa		9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	COL16A1	Q07092	1604 aa	Predicted RBP	9.38	□□□□□ -0.91
PRMT5-223	ENST00000556616	WDR17	Q8IZU2	1322 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	USP17L5	A8MUK1	530 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	FMNL1	O95466	1100 aa	Predicted RBP	9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	CANX	P27824	592 aa	Known RBP	9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	MAP10	Q9P2G4	905 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	TSPYL4	Q9UJ04	414 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	DDX19B	Q9UMR2	479 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	GPSM3	Q9Y4H4	160 aa		9.37	□□□□□ -0.91
PRMT5-223	ENST00000556616	RNMT	O43148	476 aa	Known RBP	9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	HOXB7	P09629	217 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	KRT24	Q2M2I5	525 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	ZNF530	Q6P9A1	599 aa	Predicted RBP	9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	FAM174A	Q8TBP5	190 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	STK32A	Q8WU08	396 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	API5	Q9BZZ5	524 aa	Known RBP	9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	CEP126	Q9P2H0	1117 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	NOVA2	Q9UNW9	492 aa	Known RBP	9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	SCN11A	Q9UI33	1791 aa		9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	KDM6A	O15550	1401 aa	Predicted RBP	9.36	□□□□□ -0.91
PRMT5-223	ENST00000556616	PTPRC	P08575	1304 aa		9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	COL14A1	Q05707	1796 aa	Known RBP	9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	N4BP2	Q86UW6	1770 aa	Predicted RBP	9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	FAM196B	A6NMK8	535 aa		9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	MCCD1	P59942	119 aa	Predicted RBP	9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	PPP4C	P60510	307 aa		9.35	□□□□□ -0.91
PRMT5-223	ENST00000556616	CHRNA2	Q15822	529 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms