RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SSH3Q8TE77 659 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
FOXN3-212ENST00000556541 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 HMMRO75330 724 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 YY1P25490 414 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
FOXN3-212ENST00000556541 POLA2Q14181 598 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 EPHA10Q5JZY3 1008 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 LRRC37AA6NMS7 1700 aa14.07□□□□□ -0.16
FOXN3-212ENST00000556541 NPHP1O15259 732 aa14.06□□□□□ -0.16
FOXN3-212ENST00000556541 TGFB2P61812 414 aa14.06□□□□□ -0.16
FOXN3-212ENST00000556541 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
FOXN3-212ENST00000556541 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
FOXN3-212ENST00000556541 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
FOXN3-212ENST00000556541 LMBR1LQ6UX01 489 aa14.05□□□□□ -0.16
FOXN3-212ENST00000556541 TMC4Q7Z404 712 aa14.05□□□□□ -0.16
FOXN3-212ENST00000556541 COPRSQ9NQ92 184 aa14.05□□□□□ -0.16
FOXN3-212ENST00000556541 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
FOXN3-212ENST00000556541 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
FOXN3-212ENST00000556541 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
FOXN3-212ENST00000556541 SRGNP10124 158 aa14.04□□□□□ -0.16
FOXN3-212ENST00000556541 NPR1P16066 1061 aa14.04□□□□□ -0.16
FOXN3-212ENST00000556541 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
FOXN3-212ENST00000556541 STYK1Q6J9G0 422 aa14.04□□□□□ -0.16
FOXN3-212ENST00000556541 CDC5LQ99459 802 aaKnown RBP14.04□□□□□ -0.16
FOXN3-212ENST00000556541 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
FOXN3-212ENST00000556541 SRGAP3O43295 1099 aa14.03□□□□□ -0.16
FOXN3-212ENST00000556541 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
FOXN3-212ENST00000556541 IFIT5Q13325 482 aaKnown RBP14.03□□□□□ -0.16
FOXN3-212ENST00000556541 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
FOXN3-212ENST00000556541 SIRT2Q8IXJ6 389 aa14.03□□□□□ -0.16
FOXN3-212ENST00000556541 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
FOXN3-212ENST00000556541 MASTLQ96GX5 879 aa14.03□□□□□ -0.16
FOXN3-212ENST00000556541 SPEF2Q9C093 1822 aa14.02□□□□□ -0.16
FOXN3-212ENST00000556541 ARFGEF1Q9Y6D6 1849 aa14.02□□□□□ -0.16
FOXN3-212ENST00000556541 PNMA6EA0A0J9YXQ4 647 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 ANKRD18BA2A2Z9 1011 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 H0YIN7 160 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 CIAO1O76071 339 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 ITGA6P23229 1130 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 ALDH1B1P30837 517 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 FAM161AQ3B820 660 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 HSP90AB4PQ58FF6 505 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 DDX46Q7L014 1031 aaKnown RBP14.02□□□□□ -0.17
FOXN3-212ENST00000556541 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.17
FOXN3-212ENST00000556541 RWDD1Q9H446 243 aaPredicted RBP14.02□□□□□ -0.17
FOXN3-212ENST00000556541 GREM2Q9H772 168 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
FOXN3-212ENST00000556541 BBOX1O75936 387 aa14.01□□□□□ -0.17
FOXN3-212ENST00000556541 PTPN12Q05209 780 aaKnown RBP14.01□□□□□ -0.17
FOXN3-212ENST00000556541 GRAPQ13588 217 aa14.01□□□□□ -0.17
FOXN3-212ENST00000556541 GRAPLQ8TC17 118 aaPredicted RBP14.01□□□□□ -0.17
FOXN3-212ENST00000556541 RPGRQ92834 1020 aaKnown RBP14.01□□□□□ -0.17
FOXN3-212ENST00000556541 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
FOXN3-212ENST00000556541 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
FOXN3-212ENST00000556541 TAF1P21675 1872 aa14.01□□□□□ -0.17
FOXN3-212ENST00000556541 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
FOXN3-212ENST00000556541 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
FOXN3-212ENST00000556541 CNKSR1Q969H4 720 aa14□□□□□ -0.17
FOXN3-212ENST00000556541 GCC1Q96CN9 775 aa14□□□□□ -0.17
FOXN3-212ENST00000556541 BSDC1Q9NW68 430 aaPredicted RBP14□□□□□ -0.17
FOXN3-212ENST00000556541 LTBP1Q14766 1721 aa14□□□□□ -0.17
FOXN3-212ENST00000556541 CACNA1SQ13698 1873 aa13.99□□□□□ -0.17
FOXN3-212ENST00000556541 RAB11FIP3O75154 756 aa13.99□□□□□ -0.17
FOXN3-212ENST00000556541 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
FOXN3-212ENST00000556541 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
FOXN3-212ENST00000556541 SMC5Q8IY18 1101 aa13.99□□□□□ -0.17
FOXN3-212ENST00000556541 SLX4Q8IY92 1834 aa13.99□□□□□ -0.17
FOXN3-212ENST00000556541 COL4A1P02462 1669 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 EYA2O00167 538 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 KCNA3P22001 575 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 IGHMBP2P38935 993 aaKnown RBP13.98□□□□□ -0.17
FOXN3-212ENST00000556541 CC2D2BQ6DHV5 1058 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 CCDC24Q8N4L8 307 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
FOXN3-212ENST00000556541 MROH5Q6ZUA9 1318 aa13.97□□□□□ -0.17
FOXN3-212ENST00000556541 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
FOXN3-212ENST00000556541 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
FOXN3-212ENST00000556541 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
FOXN3-212ENST00000556541 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
FOXN3-212ENST00000556541 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
FOXN3-212ENST00000556541 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
FOXN3-212ENST00000556541 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-212ENST00000556541 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
FOXN3-212ENST00000556541 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
FOXN3-212ENST00000556541 MPHOSPH8Q99549 860 aa13.96□□□□□ -0.17
FOXN3-212ENST00000556541 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
FOXN3-212ENST00000556541 SNED1Q8TER0 1413 aa13.96□□□□□ -0.18
FOXN3-212ENST00000556541 ZBTB22O15209 634 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 DPEP1P16444 411 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 G3BP1Q13283 466 aaKnown RBP eCLIP13.95□□□□□ -0.18
FOXN3-212ENST00000556541 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms