RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
SLIRP-206ENST00000556375 BBOX1O75936 387 aa14.7□□□□□ -0.06
SLIRP-206ENST00000556375 TMC4Q7Z404 712 aa14.7□□□□□ -0.06
SLIRP-206ENST00000556375 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
SLIRP-206ENST00000556375 DUOX1Q9NRD9 1551 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 KIF3CO14782 793 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 PDE8AO60658 829 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 SLC51AQ86UW1 340 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
SLIRP-206ENST00000556375 NMRK2Q9NPI5 230 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
SLIRP-206ENST00000556375 SPEF2Q9C093 1822 aa14.69□□□□□ -0.06
SLIRP-206ENST00000556375 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
SLIRP-206ENST00000556375 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
SLIRP-206ENST00000556375 GCKRQ14397 625 aa14.68□□□□□ -0.06
SLIRP-206ENST00000556375 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
SLIRP-206ENST00000556375 SP8Q8IXZ3 490 aa14.68□□□□□ -0.06
SLIRP-206ENST00000556375 COL4A5P29400 1685 aa14.68□□□□□ -0.06
SLIRP-206ENST00000556375 F6X3S4 739 aa14.67□□□□□ -0.06
SLIRP-206ENST00000556375 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-206ENST00000556375 CTSWP56202 376 aa14.67□□□□□ -0.06
SLIRP-206ENST00000556375 C1QTNF8P60827 252 aa14.67□□□□□ -0.06
SLIRP-206ENST00000556375 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
SLIRP-206ENST00000556375 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
SLIRP-206ENST00000556375 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-206ENST00000556375 CELF1Q92879 486 aaKnown RBP14.67□□□□□ -0.06
SLIRP-206ENST00000556375 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 H7C1W4 665 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 BEND3Q5T5X7 828 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 DPY19L2Q6NUT2 758 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 SCN4AP35499 1836 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 PTPRCP08575 1304 aa14.66□□□□□ -0.06
SLIRP-206ENST00000556375 CASP7P55210 303 aa14.65□□□□□ -0.06
SLIRP-206ENST00000556375 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
SLIRP-206ENST00000556375 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-206ENST00000556375 SUPT20HQ8NEM7 779 aa14.65□□□□□ -0.06
SLIRP-206ENST00000556375 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
SLIRP-206ENST00000556375 RTFDC1Q9BY42 306 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-206ENST00000556375 RPS8P62241 208 aaKnown RBP14.64□□□□□ -0.07
SLIRP-206ENST00000556375 MPNDQ8N594 471 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 VPS33BQ9H267 617 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 SEC31BQ9NQW1 1179 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 ZNF541Q9H0D2 1346 aa14.64□□□□□ -0.07
SLIRP-206ENST00000556375 FZD9O00144 591 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 PPIP5K2O43314 1243 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 LARGE2Q8N3Y3 721 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 TTLL11Q8NHH1 800 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 CCDC85AQ96PX6 553 aaPredicted RBP14.63□□□□□ -0.07
SLIRP-206ENST00000556375 BCL2L13Q9BXK5 485 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 RRAGCQ9HB90 399 aa14.63□□□□□ -0.07
SLIRP-206ENST00000556375 GRM8O00222 908 aa14.62□□□□□ -0.07
SLIRP-206ENST00000556375 TOMM70O94826 608 aa14.62□□□□□ -0.07
SLIRP-206ENST00000556375 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-206ENST00000556375 C16orf71Q8IYS4 520 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-206ENST00000556375 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
SLIRP-206ENST00000556375 A0A1B0GUL6 1792 aa14.62□□□□□ -0.07
SLIRP-206ENST00000556375 DDNO94850 711 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-206ENST00000556375 KIAA2012Q0VF49 1180 aa14.61□□□□□ -0.07
SLIRP-206ENST00000556375 AOC3Q16853 763 aa14.61□□□□□ -0.07
SLIRP-206ENST00000556375 ANKRD18AQ8IVF6 992 aa14.61□□□□□ -0.07
SLIRP-206ENST00000556375 NIM1KQ8IY84 436 aa14.61□□□□□ -0.07
SLIRP-206ENST00000556375 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-206ENST00000556375 GREM2Q9H772 168 aa14.61□□□□□ -0.07
SLIRP-206ENST00000556375 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-206ENST00000556375 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
SLIRP-206ENST00000556375 FAM161AQ3B820 660 aa14.6□□□□□ -0.07
SLIRP-206ENST00000556375 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
SLIRP-206ENST00000556375 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
SLIRP-206ENST00000556375 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
SLIRP-206ENST00000556375 POTECB2RU33 542 aa14.59□□□□□ -0.07
SLIRP-206ENST00000556375 CSF1RP07333 972 aa14.59□□□□□ -0.07
SLIRP-206ENST00000556375 GPSM2P81274 684 aa14.59□□□□□ -0.07
SLIRP-206ENST00000556375 GPC2Q8N158 579 aa14.59□□□□□ -0.07
SLIRP-206ENST00000556375 PODXL2Q9NZ53 605 aa14.59□□□□□ -0.07
SLIRP-206ENST00000556375 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
SLIRP-206ENST00000556375 PSME4Q14997 1843 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 ITGA6P23229 1130 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
SLIRP-206ENST00000556375 EYA3Q99504 573 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 POLLQ9UGP5 575 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 UTYO14607 1347 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 XDHP47989 1333 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
SLIRP-206ENST00000556375 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 C6orf229H3BNL8 230 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 IGHMBP2P38935 993 aaKnown RBP14.57□□□□□ -0.08
SLIRP-206ENST00000556375 FOXO4P98177 505 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-206ENST00000556375 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 GGA1Q9UJY5 639 aa14.57□□□□□ -0.08
SLIRP-206ENST00000556375 ZNRF3Q9ULT6 936 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms