RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 CRY2Q49AN0 593 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 TAF7LQ5H9L4 462 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 EPHA10Q5JZY3 1008 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 C2CD5Q86YS7 1000 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 RPAP2Q8IXW5 612 aaPredicted RBP15.6■□□□□ 0.09
ABCD4-223ENST00000555904 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
ABCD4-223ENST00000555904 KAZALD1Q96I82 304 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 CCDC85AQ96PX6 553 aaPredicted RBP15.6■□□□□ 0.09
ABCD4-223ENST00000555904 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
ABCD4-223ENST00000555904 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
ABCD4-223ENST00000555904 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
ABCD4-223ENST00000555904 CSF1RP07333 972 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 NPR1P16066 1061 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 TGFB2P61812 414 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 MTX1Q13505 466 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
ABCD4-223ENST00000555904 GREM2Q9H772 168 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
ABCD4-223ENST00000555904 SRGNP10124 158 aa15.58■□□□□ 0.08
ABCD4-223ENST00000555904 ITGA6P23229 1130 aa15.58■□□□□ 0.08
ABCD4-223ENST00000555904 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.08
ABCD4-223ENST00000555904 ALDH1B1P30837 517 aa15.57■□□□□ 0.08
ABCD4-223ENST00000555904 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
ABCD4-223ENST00000555904 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
ABCD4-223ENST00000555904 MASTLQ96GX5 879 aa15.57■□□□□ 0.08
ABCD4-223ENST00000555904 IGHMBP2P38935 993 aaKnown RBP15.56■□□□□ 0.08
ABCD4-223ENST00000555904 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
ABCD4-223ENST00000555904 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
ABCD4-223ENST00000555904 MPHOSPH8Q99549 860 aa15.56■□□□□ 0.08
ABCD4-223ENST00000555904 TMX4Q9H1E5 349 aaPredicted RBP15.56■□□□□ 0.08
ABCD4-223ENST00000555904 MYH3P11055 1940 aa15.56■□□□□ 0.08
ABCD4-223ENST00000555904 ANKRD31Q8N7Z5 1873 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 LRP5O75197 1615 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 PNMA6EA0A0J9YXQ4 647 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 CHRNA5P30532 468 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 HOXA10P31260 410 aaPredicted RBP15.55■□□□□ 0.08
ABCD4-223ENST00000555904 GRAPQ13588 217 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 GRAPLQ8TC17 118 aaPredicted RBP15.55■□□□□ 0.08
ABCD4-223ENST00000555904 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 CRAMP1Q96RY5 1269 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 FHDC1Q9C0D6 1143 aaPredicted RBP15.55■□□□□ 0.08
ABCD4-223ENST00000555904 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
ABCD4-223ENST00000555904 PCDHB15Q9Y5E8 787 aa15.55■□□□□ 0.08
ABCD4-223ENST00000555904 A0A0G2JLW4 131 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 DPEP1P16444 411 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 SSH3Q8TE77 659 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 KIF13BQ9NQT8 1826 aa15.54■□□□□ 0.08
ABCD4-223ENST00000555904 BBOX1O75936 387 aa15.53■□□□□ 0.08
ABCD4-223ENST00000555904 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
ABCD4-223ENST00000555904 OS9Q13438 667 aaPredicted RBP15.53■□□□□ 0.08
ABCD4-223ENST00000555904 POLA2Q14181 598 aa15.53■□□□□ 0.08
ABCD4-223ENST00000555904 HSP90AB4PQ58FF6 505 aa15.53■□□□□ 0.08
ABCD4-223ENST00000555904 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
ABCD4-223ENST00000555904 PIM2Q9P1W9 311 aa15.53■□□□□ 0.08
ABCD4-223ENST00000555904 COL11A2P13942 1736 aaPredicted RBP15.52■□□□□ 0.08
ABCD4-223ENST00000555904 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.08
ABCD4-223ENST00000555904 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.08
ABCD4-223ENST00000555904 LDHAL6AQ6ZMR3 332 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 SIL1Q9H173 461 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
ABCD4-223ENST00000555904 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 PTPN12Q05209 780 aaKnown RBP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 G3BP1Q13283 466 aaKnown RBP eCLIP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 PRPF40BQ6NWY9 871 aaKnown RBP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
ABCD4-223ENST00000555904 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 ZNF594Q96JF6 807 aaPredicted RBP15.51■□□□□ 0.07
ABCD4-223ENST00000555904 CIAO1O76071 339 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 RFX5P48382 616 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-223ENST00000555904 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
ABCD4-223ENST00000555904 ERC1Q8IUD2 1116 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 NLGN2Q8NFZ4 835 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 SYT17Q9BSW7 474 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 BSDC1Q9NW68 430 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-223ENST00000555904 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
ABCD4-223ENST00000555904 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-223ENST00000555904 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
ABCD4-223ENST00000555904 MROH5Q6ZUA9 1318 aa15.49■□□□□ 0.07
ABCD4-223ENST00000555904 EYA2O00167 538 aa15.49■□□□□ 0.07
ABCD4-223ENST00000555904 IL15P40933 162 aaPredicted RBP15.49■□□□□ 0.07
ABCD4-223ENST00000555904 PA2G4Q9UQ80 394 aaKnown RBP15.49■□□□□ 0.07
ABCD4-223ENST00000555904 KCNA3P22001 575 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 METTL24Q5JXM2 366 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 GCC1Q96CN9 775 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 EXOC6BQ9Y2D4 811 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
ABCD4-223ENST00000555904 RAB11FIP3O75154 756 aa15.47■□□□□ 0.07
ABCD4-223ENST00000555904 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms