RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 EAPPQ56P03 285 aaPredicted RBP11.65□□□□□ -0.54
AC004828.1-201ENST00000555303 MPNDQ8N594 471 aa11.65□□□□□ -0.54
AC004828.1-201ENST00000555303 TRPM7Q96QT4 1865 aa11.65□□□□□ -0.54
AC004828.1-201ENST00000555303 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 SF3B3Q15393 1217 aaKnown RBP11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 AOC3Q16853 763 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 CCDC30Q5VVM6 783 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
AC004828.1-201ENST00000555303 TMEM88BA6NKF7 163 aa11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 ITGBL1O95965 494 aaPredicted RBP11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 SCNN1DP51172 638 aa11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 RIC3Q7Z5B4 369 aa11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
AC004828.1-201ENST00000555303 IL16Q14005 1332 aa11.62□□□□□ -0.55
AC004828.1-201ENST00000555303 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
AC004828.1-201ENST00000555303 IRS4O14654 1257 aaPredicted RBP11.62□□□□□ -0.55
AC004828.1-201ENST00000555303 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
AC004828.1-201ENST00000555303 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
AC004828.1-201ENST00000555303 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 PSME4Q14997 1843 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 TNIP1Q15025 636 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 SLC51AQ86UW1 340 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 ADARB2Q9NS39 739 aaKnown RBP11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 GPRC5DQ9NZD1 345 aa11.61□□□□□ -0.55
AC004828.1-201ENST00000555303 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 CXCL9Q07325 125 aa11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 CIAPIN1Q6FI81 312 aa11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 CWC25Q9NXE8 425 aaPredicted RBP11.6□□□□□ -0.55
AC004828.1-201ENST00000555303 COL4A1P02462 1669 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 ANP32CO43423 234 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 EPS15P42566 896 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 CCDC152Q4G0S7 254 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 CELF1Q92879 486 aaKnown RBP11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 EYA3Q99504 573 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 MYD88Q99836 296 aa11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
AC004828.1-201ENST00000555303 PDE8AO60658 829 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 RPS8P62241 208 aaKnown RBP11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 ZNF609O15014 1411 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
AC004828.1-201ENST00000555303 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 RPS12P25398 132 aaKnown RBP11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 DPF2Q92785 391 aa11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 BCL2L13Q9BXK5 485 aa11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 MAP3K2Q9Y2U5 619 aa11.57□□□□□ -0.56
AC004828.1-201ENST00000555303 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 RAD17O75943 681 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
AC004828.1-201ENST00000555303 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 YDJCA8MPS7 323 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 H7C1D1 291 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 VEGFBP49765 207 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 CTSWP56202 376 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 GPSM2P81274 684 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 DEFB115Q30KQ5 88 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 COL13A1Q5TAT6 717 aaPredicted RBP11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 TBC1D16Q8TBP0 767 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 CDC5LQ99459 802 aaKnown RBP11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 POLLQ9UGP5 575 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 ABT1Q9ULW3 272 aaKnown RBP11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 XDHP47989 1333 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
AC004828.1-201ENST00000555303 ECE2O60344 883 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 IGKV5-2P06315 115 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms