RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SSFA2P28290 1259 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 SEMA3FQ13275 785 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 ILDR1Q86SU0 546 aaPredicted RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 SPATA20Q8TB22 786 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 EVI5LQ96CN4 794 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 ATP8B3O60423 1300 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 TCRBV5S4A2TA0A5A2 114 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 HMGN5P82970 282 aaKnown RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 PTPN12Q05209 780 aaKnown RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 MCM10Q7L590 875 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 THUMPD2Q9BTF0 503 aaKnown RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 RBSNQ9H1K0 784 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 AXIN2Q9Y2T1 843 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 PRKCSHP14314 528 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 FKBP5Q13451 457 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 CT47A1Q5JQC4 288 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 NAA16Q6N069 864 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 FOXR2Q6PJQ5 311 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 DNAAF4Q8WXU2 420 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 RBM42Q9BTD8 480 aaKnown RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 HELLSQ9NRZ9 838 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 TAOK2Q9UL54 1235 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 IQSEC3Q9UPP2 1182 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ZKSCAN5Q9Y2L8 839 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ZNF804BA4D1E1 1349 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 AP5Z1O43299 807 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 PFKFB2O60825 505 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ARID4AP29374 1257 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ZSCAN30Q86W11 494 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 HSD3B7Q9H2F3 369 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 UPF2Q9HAU5 1272 aaKnown RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 BRPF3Q9ULD4 1205 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 NSFL1CQ9UNZ2 370 aaKnown RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 HPSEQ9Y251 543 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 GOLGA6L3A6NEY3 463 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 TAF5LO75529 589 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 GLRX3O76003 335 aaKnown RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ZSCAN22P10073 491 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 FBLN1P23142 703 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 NASPP49321 788 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-207ENST00000554615 CYB5RLQ6IPT4 315 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 ANKLE2Q86XL3 938 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 LNPKQ9C0E8 428 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 NBPF3Q9H094 633 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 HDAC5Q9UQL6 1122 aa4.19□□□□□ -1.74
SEC23A-207ENST00000554615 BHMG1C9JSJ3 638 aaPredicted RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 SH2B2O14492 632 aaPredicted RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 CTDNEP1O95476 244 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 GCP02774 474 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 SLC4A2P04920 1241 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 HMOX1P09601 288 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 SNW1Q13573 536 aaKnown RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 PKP1Q13835 747 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 GCKRQ14397 625 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 COBLL1Q53SF7 1204 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ZMYM1Q5SVZ6 1142 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 SMYD5Q6GMV2 418 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ZNF662Q6ZS27 426 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ABTB2Q8N961 1025 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 DCAF5Q96JK2 942 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 CARD10Q9BWT7 1032 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 C19orf44Q9H6X5 657 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ANAPC4Q9UJX5 808 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 PLIN4Q96Q06 1357 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 RPS6KB1P23443 525 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 UBE2HP62256 183 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 IQCB1Q15051 598 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 CCDC93Q567U6 631 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 RASEFQ8IZ41 740 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 PIBF1Q8WXW3 757 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ZNF274Q96GC6 653 aaPredicted RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 RCOR1Q9UKL0 485 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 WDR33Q9C0J8 1336 aaKnown RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 FRMPD3Q5JV73 1810 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 A0A1W2PQ27 194 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 A0A1W2PQ64 194 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 A0A1W2PQD8 194 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 RRP9O43818 475 aaKnown RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 F13A1P00488 732 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 SLFNL1Q499Z3 407 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 ANKRD45Q5TZF3 282 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 C15orf52Q6ZUT6 534 aaKnown RBP4.18□□□□□ -1.74
SEC23A-207ENST00000554615 NYAP1Q6ZVC0 841 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 PLBD2Q8NHP8 589 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 TIGD1Q96MW7 591 aa4.18□□□□□ -1.74
SEC23A-207ENST00000554615 NBPF7P0C2Y1 421 aaPredicted RBP4.17□□□□□ -1.74
SEC23A-207ENST00000554615 DCTN1Q14203 1278 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 PLEKHO1Q53GL0 409 aaPredicted RBP4.17□□□□□ -1.74
SEC23A-207ENST00000554615 UTP14CQ5TAP6 766 aaKnown RBP4.17□□□□□ -1.74
SEC23A-207ENST00000554615 GTF3C6Q969F1 213 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 UBN2Q6ZU65 1347 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 ESPNB1AK53 854 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 SLC27A2O14975 620 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 CYP27B1O15528 508 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 MDM2Q00987 491 aaPredicted RBP4.17□□□□□ -1.74
SEC23A-207ENST00000554615 PPP1R42Q7Z4L9 355 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 ZGPATQ8N5A5 531 aaKnown RBP4.17□□□□□ -1.74
SEC23A-207ENST00000554615 SUCLG2Q96I99 432 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 BCL2L13Q9BXK5 485 aa4.17□□□□□ -1.74
SEC23A-207ENST00000554615 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms